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More updates #6

Merged
merged 13 commits into from
Nov 6, 2020
Merged

More updates #6

merged 13 commits into from
Nov 6, 2020

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chaoming0625
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  • Add "integrators" attribute in NeuType/SynType
  • Add EI network examples
  • Fix Numba Dispatcher bug
  • Update connectivity methods

@chaoming0625 chaoming0625 merged commit adb3713 into master Nov 6, 2020
ztqakita added a commit that referenced this pull request Jun 24, 2022
add numpy tests
chaoming0625 added a commit that referenced this pull request Dec 7, 2023
merge (#6)

* [running] fix multiprocessing bugs (#547)

* [running] fix multiprocessing bugs

* fix tests

* [docs] Fix typo in docs (#549)

* ⬆️ Bump conda-incubator/setup-miniconda from 2 to 3 (#551)

Bumps [conda-incubator/setup-miniconda](https://github.com/conda-incubator/setup-miniconda) from 2 to 3.
- [Release notes](https://github.com/conda-incubator/setup-miniconda/releases)
- [Changelog](https://github.com/conda-incubator/setup-miniconda/blob/main/CHANGELOG.md)
- [Commits](conda-incubator/setup-miniconda@v2...v3)

---
updated-dependencies:
- dependency-name: conda-incubator/setup-miniconda
  dependency-type: direct:production
  update-type: version-update:semver-major
...




* updates  (#550)

* [running] fix multiprocessing bugs

* fix tests

* [doc] update doc

* update

* [math] add `brainpy.math.gpu_memory_preallocation()` for controlling GPU memory preallocation

* [math] `clear_buffer_memory` support to clear array and compilation both

* [dyn] compatible old version of `.reset_state()` function

* [setup] update installation info

* ``brainpy.math.defjvp`` and ``brainpy.math.XLACustomOp.defjvp`` (#554)

* [running] fix multiprocessing bugs

* fix tests

* [doc] update doc

* update

* [math] add `brainpy.math.gpu_memory_preallocation()` for controlling GPU memory preallocation

* [math] `clear_buffer_memory` support to clear array and compilation both

* [dyn] compatible old version of `.reset_state()` function

* [setup] update installation info

* [install] upgrade dependency

* updates

* [math] add `brainpy.math.defjvp`, support to define jvp rules for Primitive with multiple results. See examples in `test_ad_support.py`

* [math] add `brainpy.math.XLACustomOp.defjvp`

* [doc] upgrade `brainpy.math.defjvp` docstring

* ⬆️ Bump actions/setup-python from 4 to 5 (#555)

Bumps [actions/setup-python](https://github.com/actions/setup-python) from 4 to 5.
- [Release notes](https://github.com/actions/setup-python/releases)
- [Commits](actions/setup-python@v4...v5)

---
updated-dependencies:
- dependency-name: actions/setup-python
  dependency-type: direct:production
  update-type: version-update:semver-major
...




---------

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: Sichao He <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
chaoming0625 added a commit that referenced this pull request Dec 10, 2023
…corresponding HH neuron models to improve numerical computation accuracy (#557)

* merge (#6)

* [running] fix multiprocessing bugs (#547)

* [running] fix multiprocessing bugs

* fix tests

* [docs] Fix typo in docs (#549)

* ⬆️ Bump conda-incubator/setup-miniconda from 2 to 3 (#551)

Bumps [conda-incubator/setup-miniconda](https://github.com/conda-incubator/setup-miniconda) from 2 to 3.
- [Release notes](https://github.com/conda-incubator/setup-miniconda/releases)
- [Changelog](https://github.com/conda-incubator/setup-miniconda/blob/main/CHANGELOG.md)
- [Commits](conda-incubator/setup-miniconda@v2...v3)

---
updated-dependencies:
- dependency-name: conda-incubator/setup-miniconda
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* updates  (#550)

* [running] fix multiprocessing bugs

* fix tests

* [doc] update doc

* update

* [math] add `brainpy.math.gpu_memory_preallocation()` for controlling GPU memory preallocation

* [math] `clear_buffer_memory` support to clear array and compilation both

* [dyn] compatible old version of `.reset_state()` function

* [setup] update installation info

* ``brainpy.math.defjvp`` and ``brainpy.math.XLACustomOp.defjvp`` (#554)

* [running] fix multiprocessing bugs

* fix tests

* [doc] update doc

* update

* [math] add `brainpy.math.gpu_memory_preallocation()` for controlling GPU memory preallocation

* [math] `clear_buffer_memory` support to clear array and compilation both

* [dyn] compatible old version of `.reset_state()` function

* [setup] update installation info

* [install] upgrade dependency

* updates

* [math] add `brainpy.math.defjvp`, support to define jvp rules for Primitive with multiple results. See examples in `test_ad_support.py`

* [math] add `brainpy.math.XLACustomOp.defjvp`

* [doc] upgrade `brainpy.math.defjvp` docstring

* ⬆️ Bump actions/setup-python from 4 to 5 (#555)

Bumps [actions/setup-python](https://github.com/actions/setup-python) from 4 to 5.
- [Release notes](https://github.com/actions/setup-python/releases)
- [Commits](actions/setup-python@v4...v5)

---
updated-dependencies:
- dependency-name: actions/setup-python
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

---------

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: Sichao He <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>

* [math] add experimental `brainpy.math.exprel`

* [delay] move delays in models of `brainpy.synapses` module into new delay register API `DynamicalSystem.register_local_delay()` and `DynamicalSystem.get_local_delay()`

* [math & dyn] add `brainpy.math.exprel`, and change the code in the corresponding HH neuron models to improve numerical computation accuracy

---------

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: Sichao He <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
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