Merge pull request #130 from Kuan-Pang/main

[Docs] Zero-shot tutorials
bowang-lab · Dec 11, 2023 · c5449c3 · c5449c3
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diff --git a/data/README.md b/data/README.md
@@ -37,3 +37,18 @@ To download data from CellXGene and build for pretraining, go to the folder [cel
 ## Datasets for the GRN analysis
 
 - Immune Human dataset [link](https://figshare.com/ndownloader/files/25717328)
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+## Datasets for zero-shot integration
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+- Lung-Kim dataset: [link](https://drive.google.com/file/d/1z_0vWYMhRuRiD1EyhuFtY9ReIR0msWaL/view?usp=sharing)
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+- COVID-19 dataset: [link](https://drive.google.com/file/d/1eD9LbxNJ35YUde3VtdVcjkwm-f4iyJ6x/view?usp=drive_link)
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+- Multiple Sclerosis (M.S.) dataset: [link](https://drive.google.com/drive/folders/1Qd42YNabzyr2pWt9xoY4cVMTAxsNBt4v?usp=sharing)
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+## Datasets for zero-shot integration
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+- COVID-19 dataset(splitted) : [link](https://drive.google.com/drive/folders/1jSPoPunGQOmd71vDsK0FS7UvmDhGdhQS?usp=sharing)
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+- Lung-Kim dataset(splitted): [link](https://drive.google.com/drive/folders/1gbfO7VqxCOkfzgHAih6hO88zFv6pd8wO?usp=sharing)
diff --git a/tutorials/Tutorial_ZeroShot_Integration.ipynb b/tutorials/Tutorial_ZeroShot_Integration.ipynb
diff --git a/tutorials/Tutorial_ZeroShot_Reference_Mapping.ipynb b/tutorials/Tutorial_ZeroShot_Reference_Mapping.ipynb