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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,45 @@ | ||
| name: hdf5 publish files in HDF5 folder from branch to S3 | ||
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| # Triggers the workflow on demand | ||
| on: | ||
| workflow_dispatch: | ||
| inputs: | ||
| local_dir: | ||
| description: 'HDF5 local directory' | ||
| type: string | ||
| required: true | ||
| target_dir: | ||
| description: 'hdf5 target bucket directory' | ||
| type: string | ||
| required: true | ||
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| permissions: | ||
| contents: read | ||
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| jobs: | ||
| publish-tag: | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | ||
| - name: Get Sources | ||
| uses: actions/checkout@692973e3d937129bcbf40652eb9f2f61becf3332 # v4.1.7 | ||
| with: | ||
| fetch-depth: 0 | ||
| ref: '${{ github.head_ref || github.ref_name }}' | ||
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| - name: List files for the space | ||
| run: | | ||
| ls -l ${{ github.workspace }} | ||
| ls ${{ github.workspace }}/HDF5 | ||
| - name: Setup AWS CLI | ||
| uses: aws-actions/configure-aws-credentials@v4 | ||
| with: | ||
| aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }} | ||
| aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }} | ||
| aws-region: ${{ secrets.AWS_REGION }} | ||
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| - name: Sync dir to S3 bucket | ||
| run: | | ||
| aws s3 sync ./HDF5/${{ inputs.local_dir }} s3://${{ secrets.AWS_S3_BUCKET }}/${{ vars.TARGET_PATH }}/${{ inputs.target_dir }} | ||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
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@@ -28,7 +28,6 @@ jobs: | |
| - name: Checkout HDF5 | ||
| uses: actions/[email protected] | ||
| with: | ||
| repository: HDFGroup/hdf5 | ||
| path: hdf5 | ||
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| - name: Configure HDF5 | ||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
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@@ -24,7 +24,6 @@ jobs: | |
| - name: Checkout HDF5 | ||
| uses: actions/[email protected] | ||
| with: | ||
| repository: HDFGroup/hdf5 | ||
| path: hdf5 | ||
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| - name: Checkout Argobots | ||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
|
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@@ -37,7 +37,6 @@ jobs: | |
| - name: Checkout HDF5 | ||
| uses: actions/[email protected] | ||
| with: | ||
| repository: HDFGroup/hdf5 | ||
| path: hdf5 | ||
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| - name: Checkout Argobots | ||
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||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
|
|
@@ -24,7 +24,6 @@ jobs: | |
| - name: Checkout HDF5 | ||
| uses: actions/[email protected] | ||
| with: | ||
| repository: HDFGroup/hdf5 | ||
| path: hdf5 | ||
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| - name: Checkout vol-external-passthrough | ||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
|
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@@ -25,7 +25,6 @@ jobs: | |
| - name: Checkout HDF5 | ||
| uses: actions/[email protected] | ||
| with: | ||
| repository: HDFGroup/hdf5 | ||
| path: hdf5 | ||
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| # Log-based VOL currently doesn't have CMake support | ||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
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@@ -44,7 +44,6 @@ jobs: | |
| - name: Checkout HDF5 | ||
| uses: actions/[email protected] | ||
| with: | ||
| repository: HDFGroup/hdf5 | ||
| path: hdf5 | ||
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| - name: Configure HDF5 with REST VOL connector | ||
|
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||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
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@@ -10,7 +10,8 @@ | |
| # [email protected]. | ||
| # | ||
| option (HDF5_USE_ZLIB_NG "Use zlib-ng library as zlib library" OFF) | ||
| option (HDF5_USE_LIBAEC_STATIC "Use static AEC library" OFF) | ||
| option (HDF5_USE_ZLIB_STATIC "Find static zlib library" OFF) | ||
| option (HDF5_USE_LIBAEC_STATIC "Find static AEC library" OFF) | ||
| option (ZLIB_USE_EXTERNAL "Use External Library Building for ZLIB" OFF) | ||
| option (SZIP_USE_EXTERNAL "Use External Library Building for SZIP" OFF) | ||
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@@ -86,16 +87,29 @@ if (HDF5_ENABLE_Z_LIB_SUPPORT) | |
| set (PACKAGE_NAME ${ZLIB_PACKAGE_NAME}${HDF_PACKAGE_EXT}) | ||
| endif () | ||
| set(ZLIB_FOUND FALSE) | ||
| find_package (ZLIB NAMES ${PACKAGE_NAME} COMPONENTS static shared) | ||
| if (HDF5_USE_ZLIB_STATIC) | ||
| set(ZLIB_SEACH_TYPE static) | ||
| else () | ||
| set(ZLIB_SEACH_TYPE shared) | ||
| endif () | ||
| find_package (ZLIB NAMES ${PACKAGE_NAME} COMPONENTS ${ZLIB_SEACH_TYPE}) | ||
| if (NOT ZLIB_FOUND) | ||
| if (CMAKE_VERSION VERSION_GREATER_EQUAL "3.24.0") | ||
| set(ZLIB_USE_STATIC_LIBS ${HDF5_USE_ZLIB_STATIC}) | ||
| endif() | ||
| find_package (ZLIB) # Legacy find | ||
| endif () | ||
| set(H5_ZLIB_FOUND ${ZLIB_FOUND}) | ||
| if (H5_ZLIB_FOUND) | ||
| set (H5_ZLIB_HEADER "zlib.h") | ||
| set (H5_ZLIB_INCLUDE_DIR_GEN ${ZLIB_INCLUDE_DIR}) | ||
| set (H5_ZLIB_INCLUDE_DIRS ${H5_ZLIB_INCLUDE_DIRS} ${ZLIB_INCLUDE_DIR}) | ||
| set (LINK_COMP_LIBS ${LINK_COMP_LIBS} ${ZLIB_LIBRARIES}) | ||
| # The FindZLIB.cmake module does not set an OUTPUT_NAME | ||
| # on the target. The target returned is: ZLIB::ZLIB | ||
| get_filename_component (libname ${ZLIB_LIBRARIES} NAME_WLE) | ||
| string (REGEX REPLACE "^lib" "" libname ${libname}) | ||
| set_target_properties (ZLIB::ZLIB PROPERTIES OUTPUT_NAME zlib-static) | ||
| set (LINK_COMP_LIBS ${LINK_COMP_LIBS} ZLIB::ZLIB) | ||
| endif () | ||
| else () | ||
| if (HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "GIT" OR HDF5_ALLOW_EXTERNAL_SUPPORT MATCHES "TGZ") | ||
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@@ -131,9 +145,14 @@ option (HDF5_ENABLE_SZIP_SUPPORT "Use SZip Filter" ON) | |
| if (HDF5_ENABLE_SZIP_SUPPORT) | ||
| option (HDF5_ENABLE_SZIP_ENCODING "Use SZip Encoding" ON) | ||
| if (NOT SZIP_USE_EXTERNAL) | ||
| if (HDF5_USE_LIBAEC_STATIC) | ||
| set(LIBAEC_SEACH_TYPE static) | ||
| else () | ||
| set(LIBAEC_SEACH_TYPE shared) | ||
| endif () | ||
| set(libaec_USE_STATIC_LIBS ${HDF5_USE_LIBAEC_STATIC}) | ||
| set(SZIP_FOUND FALSE) | ||
| find_package (SZIP NAMES ${LIBAEC_PACKAGE_NAME}${HDF_PACKAGE_EXT} COMPONENTS static shared) | ||
| find_package (SZIP NAMES ${LIBAEC_PACKAGE_NAME}${HDF_PACKAGE_EXT} COMPONENTS ${LIBAEC_SEACH_TYPE}) | ||
| if (NOT SZIP_FOUND) | ||
| find_package (SZIP) # Legacy find | ||
| endif () | ||
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