Code

Fix/use#51

Code

Merged

teslajoy merged 39 commits intodevelopmentbmeg/fhirizer:developmentfrom fix/usebmeg/fhirizer:fix/useCopy head branch name to clipboardDec 19, 2024

+1,693-1,129

Commits

Commits on Oct 11, 2024

• Merge pull request #49 from bmeg/development

  Show description for 3194f22
  teslajoy

  authored
  3194f22

Commits on Oct 30, 2024

• update medadmin occuranceTiming

  teslajoy

  committed
  9b13c21

• upgrade to latest g3t for validation

  teslajoy

  committed
  cd56f42

• bump

  teslajoy

  committed
  e1f1288

Commits on Oct 31, 2024

• demographics days to death

  teslajoy

  committed
  d16604d

• g3t validator cli

  teslajoy

  committed
  a2c436d

• fhir data validation readme update

  teslajoy

  committed
  92d2485

Commits on Nov 7, 2024

• adds identifier use

  teslajoy

  committed
  e6a4b53

Commits on Nov 26, 2024

• improves cli validate @bwalsh++

  teslajoy

  committed
  266fd8c

• explicit procedure ids - data_type mapping

  teslajoy

  committed
  e2a17cf

• reference fix

  teslajoy

  committed
  799a6fb

Commits on Nov 27, 2024

• cleans patient extension

  teslajoy

  committed
  de35ff0

• change to quantity

  teslajoy

  committed
  e534f72

Commits on Dec 2, 2024

• updated cellosaurus age + specimen mintids + patient identifier use

  teslajoy

  committed
  9352da2

Commits on Dec 4, 2024

• updated fixtures

  teslajoy

  committed
  ccfead3

Commits on Dec 5, 2024

• upgrading pydantic -> 2.10 and fhir.resources -> 8.0.0b4 - in-progress

  teslajoy

  committed
  c118e6e

Commits on Dec 6, 2024

• updated -> fhir.resource 8.0.0 & Pydantic 2.10

  teslajoy

  committed
  1766eb1

• bump

  teslajoy

  committed
  7d860dc

Commits on Dec 9, 2024

• fixes Pydantic serializer warning

  teslajoy

  committed
  6f268ec

• initial researchstudy patient group

  teslajoy

  committed
  3aa7a70

Commits on Dec 10, 2024

• adds post processing of researchstudy researchsubjects Group entity

  teslajoy

  committed
  cbf66d4

• bump

  teslajoy

  committed
  0bf7fc6

• adds explicit observations for time events

  teslajoy

  committed
  ef7e6f1

Commits on Dec 13, 2024

• patch for DocumentReference size limit

  teslajoy

  committed
  588f935

Commits on Dec 16, 2024

• docref memeber and initial value/string/Decimal + fields as empty objects issue fix

  teslajoy

  committed
  da46831

Commits on Dec 17, 2024

• attempt to add files missing fields

  teslajoy

  committed
  509ee6a

• case submitter id for tril/error of file subject substring

  teslajoy

  committed
  ee6af53

• docref subject tmp fix + cleanup + submitter ids

  teslajoy

  committed
  b0c7b2f

• update fixtures

  teslajoy

  committed
  d4cac95

• misc

  teslajoy

  committed
  0f525ca

Commits on Dec 18, 2024

• adds test for member and subject check

  teslajoy

  committed
  b15b697

• remove patient reference from observation focus - leaves reference to subject

  teslajoy

  committed
  c8c1bae

• bump

  teslajoy

  committed
  8281667

• adds halo spinner + fixture fix

  teslajoy

  committed
  24ba511

• stop spinner before observation

  teslajoy

  committed
  0c91ad9

Commits on Dec 19, 2024

• cellosaurus new-versions output cleanup

  teslajoy

  committed
  5101e61

• adds spinner to HTAN

  teslajoy

  committed
  8bd598d

• moves clean resource to utils

  teslajoy

  committed
  5613dea

• HTAN changes for new fhir.resource + pydantic versions + happi server validation

  teslajoy

  committed
  4a701d7