Update pins #125

	name: Python Package using Conda

	on:
	push:
	branches: [ master ]
	pull_request:

	jobs:
	build-linux:
	strategy:
	max-parallel: 5
	matrix:
	python-version: ['3.8', '3.9', '3.10', '3.11', '3.12']
	os: [ubuntu-latest, macos-13, macos-14]
	runs-on: ${{ matrix.os }}
	steps:
	- uses: actions/checkout@v2
	with:
	submodules: true
	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v2
	with:
	python-version: ${{ matrix.python-version }}
	- name: Add conda to system path
	run: \|
	# $CONDA is an environment variable pointing to the root of the miniconda directory
	echo $CONDA/bin >> $GITHUB_PATH
	- name: Install dependencies
	run: \|
	conda install python=${{ matrix.python-version }} cython scikit-bio numpy
	pip install versioneer
	pip install -e .
	- name: Lint with flake8
	run: \|
	conda install flake8
	# stop the build if there are Python syntax errors or undefined names
	flake8 bp --count --select=E9,F63,F7,F82 --show-source --statistics
	# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
	flake8 bp --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
	- name: Test with pytest
	run: \|
	conda install pytest
	pytest

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