Upgrading numpy version #278
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ugh .. we are getting a bunch of outdated errors from bokeh + pandas nonsense. |
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ok, turns out that both matplotlib and bokeh haven been updated. The plots look fine, but the order of which the objects have been plotted has changed.
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Tests should be passing now. We will want to deprecate all visualizations in gneiss in the near future. The heatmap dendrograms have been pushed to calour and the radial trees have been pushed to empress. |
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Alright. Merging. |
mortonjt
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* ENH: upgrade numpy * DOC: updating numpy docstring * ENH: upgrading version number * BLD: setting matplotlib backend to agg * trimming down ci requirements * adding back in flake8 and pep8 * adding pip back in * DOC: raw strings * flake8 * looks like bokeh flipped the ordering. weird * matplotlib tick labels swapped * py36 * flake8 * forgot import
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This will allow us to upgrade the skbio version