fineRADstructure

[lecorguille]

ℹ️
Bioconda has finished the GCC7 migration. If you are dealing with C/C++ or Python package it can be that you need to rebuild other dependent packages. Bioconda utils - update-pinning will assist you with that. If you have any questions please use issue 13578.

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• I have read the guidelines for bioconda recipes.
• This PR adds a new recipe.
• AFAIK, this recipe is directly relevant to the biological sciences (otherwise, please submit to the more general purpose conda-forge channel).
• This PR updates an existing recipe.
• This PR does something else (explain below).

[biocondabot]

Package(s) built on CircleCI are ready for inspection:

Arch	Package	Repodata
linux-64	fineradstructure-0.3.2r109-hbbd2374_0.tar.bz2	repodata.json

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You may alsu use conda to install these:

• For packages in linux-64:

  conda install -c https://57231-42372094-gh.circle-artifacts.com/0/tmp/artifacts/packages <package name>
  

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Docker image(s) built:

Package	Tag	Install with docker
fineradstructure	0.3.2r109--hbbd2374_0	show curl "https://57231-42372094-gh.circle-artifacts.com/0/tmp/artifacts/images/fineradstructure%3A0.3.2r109--hbbd2374_0.tar.gz" | gzip -dc | docker load

[dpryan79]

Thanks @lecorguille!

[lecorguille]

Thanks to you for the review!

[lecorguille]

@dpryan79 Do you know why the package isn't available:

$ conda create -n fineradstructure-0.3.2r109 fineradstructure
Solving environment: failed

PackagesNotFoundError: The following packages are not available from current channels:

  - fineradstructure

Current channels:

  - https://conda.anaconda.org/bioconda/linux-64
  - https://conda.anaconda.org/bioconda/noarch
  - https://conda.anaconda.org/conda-forge/linux-64
  - https://conda.anaconda.org/conda-forge/noarch
  - https://repo.anaconda.com/pkgs/main/linux-64
  - https://repo.anaconda.com/pkgs/main/noarch
  - https://repo.anaconda.com/pkgs/free/linux-64
  - https://repo.anaconda.com/pkgs/free/noarch
  - https://repo.anaconda.com/pkgs/r/linux-64
  - https://repo.anaconda.com/pkgs/r/noarch

$ conda info

     active environment : None
       user config file : /home/fr2424/sib/lecorguille/.condarc
 populated config files : /home/fr2424/sib/lecorguille/.condarc
          conda version : 4.5.11
    conda-build version : not installed
         python version : 3.5.2.final.0
       base environment : /usr/local/genome2/conda3  (writable)
           channel URLs : https://conda.anaconda.org/conda-forge/linux-64
                          https://conda.anaconda.org/conda-forge/noarch
                          https://conda.anaconda.org/bioconda/linux-64
                          https://conda.anaconda.org/bioconda/noarch
                          https://repo.anaconda.com/pkgs/main/linux-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/free/linux-64
                          https://repo.anaconda.com/pkgs/free/noarch
                          https://repo.anaconda.com/pkgs/r/linux-64
                          https://repo.anaconda.com/pkgs/r/noarch
          package cache : /usr/local/genome2/conda3/pkgs
                          /home/fr2424/sib/lecorguille/.conda/pkgs
       envs directories : /usr/local/genome2/conda3/envs
                          /home/fr2424/sib/lecorguille/.conda/envs
               platform : linux-64
             user-agent : conda/4.5.11 requests/2.18.4 CPython/3.5.2 Linux/2.6.32-431.17.1.el6.x86_64 centos/6.5 glibc/2.12
                UID:GID : 589:1000
             netrc file : None
           offline mode : False

[dpryan79]

It probably wasn't through the cache yet. It's appearing now from what I can see: https://anaconda.org/bioconda/fineradstructure/files

[lecorguille]

Oki, I saw the files at the moment but didn't manage to install it.
I wasn't enough patient. Now, it's ok. Thanks you for your time.