There is a light at the end of the tunnel

recipes/r-coloc/meta.yaml

@@ -33,7 +33,7 @@ requirements:
     - r-flashclust
     - r-ggplot2
     - r-reshape
-    - r-snpstats
+    - bioconductor-snpstats
     - r-speedglm
 
   run:
@@ -42,7 +42,7 @@ requirements:
     - r-flashclust
     - r-ggplot2
     - r-reshape
-    - r-snpstats
+    - bioconductor-snpstats
     - r-speedglm
 
 test:

recipes/r-metama/meta.yaml

@@ -29,12 +29,12 @@ requirements:
   host:
     - r-base
     - r-smvar
-    - r-limma
+    - bioconductor-limma
 
   run:
     - r-base
     - r-smvar
-    - r-limma
+    - bioconductor-limma
 
 test:
   commands:

recipes/r-mutoss/meta.yaml

@@ -30,14 +30,14 @@ requirements:
   host:
     - r-base
     - r-multcomp >=1.1_0
-    - r-multtest >=2.2.0
+    - bioconductor-multtest >=2.2.0
     - r-mvtnorm
     - r-plotrix
 
   run:
     - r-base
     - r-multcomp >=1.1_0
-    - r-multtest >=2.2.0
+    - bioconductor-multtest >=2.2.0
     - r-mvtnorm
     - r-plotrix
 

recipes/r-nanostringnorm/meta.yaml

@@ -15,29 +15,25 @@ source:
 
 build:
   merge_build_host: True  # [win]
-
   number: 0
   skip: true  # [win32]
-
   rpaths:
     - lib/R/lib/
     - lib/
 
 requirements:
   build:
     - {{posix}}zip               # [win]
-
   host:
     - r-base
     - r-xml >=3.98_1.5
     - r-gdata >=2.8.2
-    - r-vsn >=3.22.0
-
+    - bioconductor-vsn >=3.22.0
   run:
     - r-base
     - r-xml >=3.98_1.5
     - r-gdata >=2.8.2
-    - r-vsn >=3.22.0
+    - bioconductor-vsn >=3.22.0
 
 test:
   commands:
@@ -51,8 +47,6 @@ about:
   summary: A set of tools for normalizing, diagnostics and visualization of NanoString nCounter
     data.
   license_family: GPL2
-  license_file: '{{ environ["PREFIX"] }}\/lib\/R\/share\/licenses\/GPL-2'  # [unix]
-  license_file: '{{ environ["PREFIX"] }}\R\share\licenses\GPL-2'  # [win]
 extra:
   recipe-maintainers:
     - MathiasHaudgaard

recipes/r-structssi/meta.yaml

@@ -15,36 +15,31 @@ source:
 
 build:
   merge_build_host: True  # [win]
-
   number: 2
-
   rpaths:
     - lib/R/lib/
     - lib/
 
 requirements:
   build:
     - {{posix}}zip               # [win]
-
   host:
     - r-base
     - r-ggplot2
     - r-igraph
-    - r-multtest
+    - bioconductor-multtest
     - r-reshape2
     - r-rjson
-
   run:
     - r-base
     - r-ggplot2
     - r-igraph
-    - r-multtest
+    - bioconductor-multtest
     - r-reshape2
     - r-rjson
 
 test:
   commands:
-
     - $R -e "library('structSSI')"           # [not win]
     - "\"%R%\" -e \"library('structSSI')\""  # [win]
 
@@ -54,8 +49,6 @@ about:
   summary: Performs multiple testing corrections that take specific structure of hypotheses into
     account.
   license_family: GPL2
-  license_file: '{{ environ["PREFIX"] }}\/lib\/R\/share\/licenses\/GPL-2'  # [unix]
-  license_file: '{{ environ["PREFIX"] }}\R\share\licenses\GPL-2'  # [win]
 extra:
   recipe-maintainers:
     - MathiasHaudgaard

recipes/r-tcga2stat/meta.yaml

@@ -15,30 +15,25 @@ source:
 
 build:
   merge_build_host: True  # [win]
-
   number: 2
-
   rpaths:
     - lib/R/lib/
     - lib/
 
 requirements:
   build:
     - {{posix}}zip               # [win]
-
   host:
     - r-base
-    - r-cntools
+    - bioconductor-cntools
     - r-xml
-
   run:
     - r-base
-    - r-cntools
+    - bioconductor-cntools
     - r-xml
 
 test:
   commands:
-
     - $R -e "library('TCGA2STAT')"           # [not win]
     - "\"%R%\" -e \"library('TCGA2STAT')\""  # [win]
 
@@ -48,8 +43,6 @@ about:
   summary: Automatically downloads and processes TCGA genomics and clinical data into a format
     convenient for statistical analyses in the R environment.
   license_family: GPL2
-  license_file: '{{ environ["PREFIX"] }}\/lib\/R\/share\/licenses\/GPL-2'  # [unix]
-  license_file: '{{ environ["PREFIX"] }}\R\share\licenses\GPL-2'  # [win]
 extra:
   recipe-maintainers:
     - MathiasHaudgaard