24.08.22 release

[HadleyKing]

• BCO scoring changes

• Add New Production Deployment md

Changes to be committed:
deleted: docs/bco_scores.json
modified: docs/deployment/productionDeployment.md
new file: docs/newProductionInstance.md

• Update config.md

• Add API endpoint for basic comaprison

Changes to be committed:
modified: biocompute/apis.py
modified: biocompute/urls.py
modified: requirements.txt

• Fix Django CI issue (Fix Django CI issue #340)

biocompute-objects/portal_userdb#380

Changes to be committed:
modified: .github/workflows/django.yml
modified: biocompute/apis.py
modified: biocompute/models.py
modified: config/settings.py
modified: config/urls.py

• Update to BcoValidator.load_schema (Update to BcoValidator.load_schema #341)

Updated the function to check locally for the most used schemas. Improves testing and speed in BCO validation.

Changes to be committed:
modified: biocompute/services.py
renamed: config/IEEE/2791object.json -> config/schemas/2791object.json
new file: config/schemas/dataset_extension.json
renamed: config/IEEE/description_domain.json -> config/schemas/description_domain.json
renamed: config/IEEE/error_domain.json -> config/schemas/error_domain.json
renamed: config/IEEE/execution_domain.json -> config/schemas/execution_domain.json
new file: config/schemas/fhir_extension.json
new file: config/schemas/galaxy_extension.json
renamed: config/IEEE/io_domain.json -> config/schemas/io_domain.json
new file: config/schemas/license_extension.json
renamed: config/IEEE/parametric_domain.json -> config/schemas/parametric_domain.json
renamed: config/IEEE/provenance_domain.json -> config/schemas/provenance_domain.json
new file: config/schemas/scm_extension.json
renamed: config/IEEE/usability_domain.json -> config/schemas/usability_domain.json

• Add additional schema files and reorganize

Changes to be committed:
modified: biocompute/services.py
new file: config/schemas/1.1.0/dataset_extension.json
new file: config/schemas/1.1.0/fhir_extension.json
new file: config/schemas/1.1.0/galaxy_extension.json
new file: config/schemas/1.1.0/license_extension.json
new file: config/schemas/1.1.0/scm_extension.json
renamed: config/schemas/dataset_extension.json -> config/schemas/1.2.0/dataset_extension.json
renamed: config/schemas/fhir_extension.json -> config/schemas/1.2.0/fhir_extension.json
renamed: config/schemas/galaxy_extension.json -> config/schemas/1.2.0/galaxy_extension.json
renamed: config/schemas/license_extension.json -> config/schemas/1.2.0/license_extension.json
renamed: config/schemas/scm_extension.json -> config/schemas/1.2.0/scm_extension.json
renamed: config/schemas/2791object.json -> config/schemas/2791/2791object.json
renamed: config/schemas/description_domain.json -> config/schemas/2791/description_domain.json
renamed: config/schemas/error_domain.json -> config/schemas/2791/error_domain.json
renamed: config/schemas/execution_domain.json -> config/schemas/2791/execution_domain.json
renamed: config/schemas/io_domain.json -> config/schemas/2791/io_domain.json
renamed: config/schemas/parametric_domain.json -> config/schemas/2791/parametric_domain.json
renamed: config/schemas/provenance_domain.json -> config/schemas/2791/provenance_domain.json
renamed: config/schemas/usability_domain.json -> config/schemas/2791/usability_domain.json
modified: config/settings.py
modified: requirements.txt

• Add instructions for Docker deployment

Changes to be committed:
modified: Dockerfile
modified: docker-compose.yml
modified: docs/deployment/dockerDeployment.md
new file: entrypoint.sh

• Update comparison API (Update comparison API #344)

Changes to be committed:
modified: biocompute/apis.py

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