Code

Bioconductor Warnings#159

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Merged

jjjermiah merged 19 commits intomasterbhklab/PharmacoGx:masterfrom develbhklab/PharmacoGx:develCopy head branch name to clipboardApr 16, 2024

+230-303

Commits

Commits on Feb 7, 2024

• fix: error with summarizeSensitivity Profiles on LongTables where it assumes paramaters

  jjjermiah

  committed
  9a13be8

Commits on Feb 8, 2024

• add column arguments to drugDoseResponseCurve

  jjjermiah

  committed
  3d54535

Commits on Feb 21, 2024

• Update cellline parameter in drugDoseResponseCurve function

  jjjermiah

  committed
  650d0e5

Commits on Mar 1, 2024

• docs: add documentation for summarizeSensitivityProfiles

  jjjermiah

  committed
  ed19577

Commits on Apr 8, 2024

• fix: Refactor buildComboProfiles function in computeSynergy.R example line to be under 100 chars

  jjjermiah

  committed
  4e38299

• fix: Add sample_col and treatment_col arguments to drugDoseResponseCurve function

  jjjermiah

  committed
  a7d8565

• fix: remove unlinked [boolean] term as it causes warnings

  jjjermiah

  committed
  5e17a0c

• chore: delete CreatingPharmacoSet.R Remove CreatingPharmacoSet.R vignette

  jjjermiah

  committed
  c197d9d

• fix: Update CreatingPharmacoSet.Rmd to install required packages if not already installed

  jjjermiah

  committed
  7361b1e

• docs: update Vignette to reflect new changes

  jjjermiah

  committed
  f9eb62e

• chore: .Rbuildignore and DESCRIPTION Update .Rbuildignore and DESCRIPTION files

  jjjermiah

  committed
  048e913

• update CreatingPharmacoSet.Rmd Refactor vignette code to install required packages if not already installed

  jjjermiah

  committed
  f5ae5e1

Commits on Apr 12, 2024

• Update version to 3.7.5 in DESCRIPTION file

  jjjermiah

  committed
  c52e6c6

• docs: update all docs with roxygen.

  Show description for b71fff2
  jjjermiah

  committed
  b71fff2

• refactor: Refactor code in R/methods-[.R, R/updateObject-methods.R, src/metaPermC.c, and R/methods-summarizeSensitivityProfiles.R

  jjjermiah

  committed
  032e864

• ci: update R-CMD-check-bioc.yml Update branch filter in R-CMD-check-bioc.yml workflow

  jjjermiah

  committed
  592a42e

• Update branch filter in R-CMD-check-bioc.yml workflow

  jjjermiah

  committed
  9324b7d

• Update branch filter in R-CMD-check-bioc.yml workflow

  jjjermiah

  committed
  4a80e0b

• Merge pull request #158 from bhklab/156-warning-on-bioc

  Show description for c4967cc
  jjjermiah

  authored
  c4967cc