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30 Open 87 Closed
30 Open 87 Closed
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Issues list

issue using cache=True in scanpy read
#371 opened Nov 8, 2024 by bhoellbacher
seaborn jointplot fails if passing multiple positional arguments
#369 opened Nov 7, 2024 by bhoellbacher
bc.st.clr_normalize() fails
#367 opened Nov 6, 2024 by bhoellbacher
Issue with sig.read_annotconfig in cell_type
#363 opened Oct 7, 2024 by GretaBordinETH
besca installation failure
#347 opened Aug 10, 2024 by Silencewu7
1
error in bc.pl.riverplot_2categories() figsize param with besca253 bug Something isn't working
#346 opened Jun 5, 2024 by llumdi
percent_mito in reality reflects the fraction not the pct enhancement New feature or request invalid This doesn't seem right
#345 opened Jun 4, 2024 by llumdi
Issue with tl.annotate_cells_cluster function
#344 opened May 30, 2024 by prasadm1k
new 10x mtx version
#342 opened Mar 25, 2024 by wangjiawen2013
1
high memory consumption and nonetype error
#341 opened Mar 21, 2024 by wangjiawen2013
LFS quota exceeded
#323 opened Aug 31, 2023 by idavydov
27
Allow flavor selection in bc.st.highly_variable_genes() enhancement New feature or request std workflow Changes to the standard workflow.
#320 opened Aug 22, 2023 by llumdi
@swalpe
Move to poetry as a dependency manager
#317 opened Aug 8, 2023 by kohleman
use_raw=False not working in bc.tl.sig.combined_signature_score( ) bug Something isn't working
#312 opened Jul 18, 2023 by llumdi
env yaml file
#298 opened Jun 1, 2023 by schmucr1
2
Storing public data sets in installation directory is problematic
#272 opened Jan 4, 2023 by schmucr1
KeyError: 'base' when using bc.tl.dge.get_de() or bc.st.additional_labeling() bug Something isn't working
#271 opened Dec 14, 2022 by llumdi
@kohleman
3
Remove duplicated log messages
#265 opened Nov 15, 2022 by kohleman
@kohleman
2
Upgrading plot functions with axes enhancement New feature or request good first issue Good for newcomers
#188 opened Dec 20, 2021 by ajulienla
figure size for celllabel_quant_stackedbar enhancement New feature or request
#181 opened Nov 1, 2021 by marlisese
1
Additional parameters min_fract_pos and min_cells_per_group in perform_dge() enhancement New feature or request
#180 opened Oct 25, 2021 by llumdi
Getting started guide and interactive notebooks documentation Improvements or additions to documentation for future topics to be addressed in future when pressing issues have been dealt with
#177 opened Oct 8, 2021 by hatjek
Pending improvements in the Silhouette Computation function enhancement New feature or request
#171 opened Aug 17, 2021 by alberto-valdeolivas
Documentation for citeseq workflow missing documentation Improvements or additions to documentation enhancement New feature or request
#161 opened Jun 2, 2021 by llumdi
@schmucr1
4
Expanded cell filtering for datasets with protein data enhancement New feature or request
#160 opened May 31, 2021 by llumdi
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