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Turn off docker builds on tags #162

Merged
merged 78 commits into from
Mar 16, 2021
Merged

Turn off docker builds on tags #162

merged 78 commits into from
Mar 16, 2021

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johnlees
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Hitting these on branches with a 'v'

Danderson123 and others added 30 commits December 7, 2020 11:10
@Danderson123
Skip tree build if fewer than 3 samples
cef9476
@Danderson123
Merge branch 'master' into web
0587c50
@johnlees
Move web code into module
b51f4a2
@johnlees
Try to set secret key
b639307
@johnlees
Move azure CI to github actions
6e89ea6
@johnlees
Merge change for when novel strain assigned
39e9707
@johnlees
Update environment.yml
cae1011
@johnlees
Add docker action
6bc4a9c
@johnlees
Fix yaml syntax
95eb749
@johnlees
More actions changes
d7df86e
@johnlees
Add OS to docker action; custom python
a9089ce
@johnlees
Attempt to activate conda environment
41c161c
@johnlees
Remove secret from docker
c67a6a5
@johnlees
Missing space in tests
8c60469
@johnlees
Move web code to correct function
796e3d3
@johnlees
Use docker version of actions
a46c16f
@johnlees
Fix docker yaml
d03fbb7
@johnlees
Point to correct dockerfile
a8a70e8
@johnlees
Newline in azure-pipelines
818c438
@johnlees
Trigger CI on PR targeting master
9d77b3e
@johnlees
Correct name of azure pipelines
c2bd44d
@johnlees
Update dockerfile to actually get code
f19958b
@johnlees
Try to use default gunicorn port
ecddaa9
@johnlees
Another attempt to change the port
a914a4e
@johnlees
Merge changes from master
3c8c928
@johnlees
Add host IP to gunicorn launch
207529a
@johnlees
Bind loopback; add test
0d78b13
@johnlees
Add ssh to container
1a0c053
@johnlees
Run ssh service; try to optimise gunicorn command
e693950
@johnlees
Fix apt line
81d8e12
Danderson123 and others added 29 commits February 2, 2021 15:05
@Danderson123
Update include file location to check for no of isolates
4c515fc
@Danderson123
remove web arg from visualise
ee10f50
@johnlees
Move copy to entrypoint; fix path errors in visualise
c91b40d
@johnlees
Set default for env variable in web
42bba82
@johnlees
Fix visualise tests
b8ceb45
@johnlees
Update visualise command in network route
33c36ee
@johnlees
Update previous clustering argument
c2cf4a2
@johnlees
Fix path basename in cluster write
855db78
@johnlees
Fix output location for network route
831d0f3
@johnlees
Update visualise args
41cd6ce
@Danderson123
Automated API tests
a1f7f7c
@Danderson123
Remove path insertion
40998d0
@Danderson123
Force gt v2.35
dc445e2
@Danderson123
Merge api routes and set model_dir to reference
3e18607
@Danderson123
Remove path insert from web test
b26a3db
@johnlees
Workaround for web query graph
2f0e282
@johnlees
Fix web test
0bcb48c
@johnlees
Add assets needed to run web version
2bf46c3
@johnlees
Attempt to add ACR action
04c4b1c
@johnlees
Fix docker build cmd
0a281a0
@johnlees
Add path to Dockerfile
26f75a5
@johnlees
Change tag in ACR
cb2fefe
@johnlees
Add check that visualise has enough sequences
ee5b0f2
@johnlees
Merge branch 'master' into docker
f222d26
@johnlees
Merge branch 'hotfix-tree' into docker
5af6481
@johnlees
Fix bracket
30fa3c9
@johnlees
Merge branch 'master' into docker
ff64256
@johnlees
Turn off docker push on tags
d1cea98
@johnlees
Decrease gworker threads
6873f5d
@johnlees johnlees merged commit a2de703 into master Mar 16, 2021
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2 participants
@johnlees @Danderson123