Merge pull request #319 from tgttunstall/master

Replaced deprecated 'rU' with 'r' to make this work on recent python
bacpop · Jul 24, 2024 · cdf1b2c · cdf1b2c
2 parents 66a4329 + cf577c4
commit cdf1b2c
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/PopPUNK/utils.py b/PopPUNK/utils.py
@@ -422,7 +422,7 @@ def readRfile(rFile, oneSeq=False):
     """
     names = []
     sequences = []
-    with open(rFile, 'rU') as refFile:
+    with open(rFile, 'r') as refFile:
         for refLine in refFile:
             rFields = refLine.rstrip().split("\t")
             if len(rFields) < 2: