Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

feat(fhir): Add missing properties to CapabilityStatement #1218

Closed
wants to merge 1 commit into from
Closed
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
Original file line number Diff line number Diff line change
Expand Up @@ -262,6 +262,45 @@ public Collection<Document> getDocuments() {
return documents;
}

public CapabilityStatement withUrl(Uri resourceUrl, Uri baseUrl) {
return new CapabilityStatement(
getId(),
getMeta(),
getImplicitRules(),
getLanguage(),
getText(),
resourceUrl,
getVersion(),
getName(),
getTitle(),
getStatus(),
getExperimental(),
getDate(),
getPublisher(),
getContacts(),
getDescription(),
getUsageContexts(),
getJurisdictions(),
getPurpose(),
getToolingId(),

getResourceType(),
getIdentifiers(),
getCopyright(),
getKind(),
getInstantiates(),
getImports(),
getSoftware(),
getImplementation().withUrl(baseUrl),
getFhirVersion(),
getFormats(),
getPatchFormats(),
getImplementationGuides(),
getRests(),
getMessagings(),
getDocuments());
}

public static Builder builder(String id) {
return new Builder(id);
}
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -67,6 +67,10 @@ public Reference getCustodian() {
return custodian;
}

public Implementation withUrl(final Uri url) {
return new Implementation(getDescription(), url, getCustodian());
}

public static Builder builder() {
return new Builder();
}
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -21,6 +21,7 @@

import org.junit.Test;

import com.b2international.snowowl.fhir.core.codesystems.CapabilityStatementKind;
import com.b2international.snowowl.fhir.core.model.capabilitystatement.CapabilityStatement;
import com.b2international.snowowl.fhir.core.model.operationdefinition.OperationDefinition;
import com.b2international.snowowl.fhir.tests.FhirRestTest;
Expand All @@ -40,6 +41,15 @@ public void capabilityStatementTest() {
.assertThat()
.statusCode(200)
.body("resourceType", equalTo("CapabilityStatement"))
.body("url", notNullValue())
.body("version", notNullValue())
.body("name", notNullValue())
.body("title", notNullValue())
.body("status", notNullValue())
.body("date", notNullValue())
.body("description", notNullValue())
.body("kind", equalTo(CapabilityStatementKind.INSTANCE.getCodeValue()))
.body("fhirVersion", equalTo("4.0.1"))
.body("rest[0]", notNullValue())
.body("rest[0].resource[0]", notNullValue());

Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -21,28 +21,28 @@
import static com.b2international.snowowl.core.rest.OpenAPIExtensions.B2I_OPENAPI_X_NAME;
import static com.google.common.collect.Maps.newHashMap;

import java.util.Collection;
import java.util.Comparator;
import java.util.List;
import java.util.Map;
import java.util.*;
import java.util.function.Supplier;
import java.util.stream.Collectors;

import org.eclipse.core.runtime.Platform;
import org.osgi.framework.Version;
import org.springdoc.webmvc.api.OpenApiWebMvcResource;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.web.bind.annotation.GetMapping;
import org.springframework.web.bind.annotation.PathVariable;
import org.springframework.web.bind.annotation.RequestMapping;
import org.springframework.web.bind.annotation.RestController;
import org.springframework.web.servlet.mvc.method.annotation.MvcUriComponentsBuilder;
import org.springframework.web.util.UriComponents;
import org.springframework.web.util.UriComponentsBuilder;

import com.b2international.commons.StringUtils;
import com.b2international.commons.exceptions.NotFoundException;
import com.b2international.snowowl.core.ApplicationContext;
import com.b2international.snowowl.core.CoreActivator;
import com.b2international.snowowl.core.config.SnowOwlConfiguration;
import com.b2international.snowowl.core.date.Dates;
import com.b2international.snowowl.core.rest.FhirApiConfig;
import com.b2international.snowowl.core.rest.SnowOwlOpenApiWebMvcResource;
import com.b2international.snowowl.fhir.core.codesystems.CapabilityStatementKind;
Expand Down Expand Up @@ -87,12 +87,12 @@ public class FhirMetadataController extends AbstractFhirController {
@Autowired
private FhirApiConfig config;

private static class Holder {
CapabilityStatement capabilityStatement;
Map<String, OperationDefinition> operationMap;
}
private record StatementAndOperations (
CapabilityStatement capabilityStatement,
Map<String, OperationDefinition> operationMap
) { }

private final Supplier<Holder> capabilityStatementSupplier = Suppliers.memoize(this::initCache);
private final Supplier<StatementAndOperations> capabilityStatementSupplier = Suppliers.memoize(this::initCache);

@Operation(
summary="Retrieve the capability statement",
Expand All @@ -108,7 +108,11 @@ private static class Holder {
})
@GetMapping(value="/metadata")
public CapabilityStatement metadata() {
return capabilityStatementSupplier.get().capabilityStatement;
final String resourceUrl = MvcUriComponentsBuilder.fromMethodName(FhirMetadataController.class, "metadata").toUriString();
final String baseUrl = MvcUriComponentsBuilder.fromController(FhirMetadataController.class).toUriString();

final CapabilityStatement capabilityStatement = capabilityStatementSupplier.get().capabilityStatement();
return capabilityStatement.withUrl(new Uri(resourceUrl), new Uri(baseUrl));
}

/**
Expand Down Expand Up @@ -137,8 +141,7 @@ public OperationDefinition operationDefinition(
return operationDefinition;
}

private Holder initCache() {
final Holder holder = new Holder();
private StatementAndOperations initCache() {
// XXX: we know that the subclass is instantiated (in SnowOwlApiConfig)
final OpenAPI openAPI = ((SnowOwlOpenApiWebMvcResource) openApiWebMvcResource).getOpenApi();
final Collection<Resource> resources = collectResources(openAPI);
Expand All @@ -148,12 +151,12 @@ private Holder initCache() {
.mode(RestfulCapabilityMode.SERVER)
.resources(resources);

holder.operationMap = newHashMap();
final Map<String, OperationDefinition> operationMap = newHashMap();

for (final OperationDefinition operationDefinition : operationDefinitions) {
for (final Code code : operationDefinition.getResources()) {
final String key = code.getCodeValue() + operationDefinition.getName();
holder.operationMap.put(key, operationDefinition);
operationMap.put(key, operationDefinition);

restBuilder.addOperation(com.b2international.snowowl.fhir.core.model.capabilitystatement.Operation.builder()
.name(operationDefinition.getName())
Expand All @@ -162,34 +165,58 @@ private Holder initCache() {
}
}

final String serverVersion = Platform.getBundle(CoreActivator.PLUGIN_ID)
.getVersion()
.toString();
CapabilityStatement capabilityStatement = createCapabilityStatement(restBuilder);

String description = ApplicationContext.getServiceForClass(SnowOwlConfiguration.class).getDescription();
return new StatementAndOperations(capabilityStatement, operationMap);
}

private CapabilityStatement createCapabilityStatement(final Rest.Builder restBuilder) {

holder.capabilityStatement = CapabilityStatement.builder()
.name("FHIR Capability statement for Snow Owl© Terminology Server")
final Version bundleVersion = Platform.getBundle(CoreActivator.PLUGIN_ID).getVersion();
final String softwareVersion = bundleVersion.toString();
final String qualifier = bundleVersion.getQualifier();
final Date date = getDateFromQualifier(qualifier);

final String description = ApplicationContext.getServiceForClass(SnowOwlConfiguration.class)
.getDescription();

return CapabilityStatement.builder()
// .url(...) is added later
.version(softwareVersion)
.name("snow-owl-capability-statement")
.title("FHIR Capability statement for Snow Owl© Terminology Server")
.description("This statement describes FHIR resource types and operations supported by the terminology server.")
.status(PublicationStatus.ACTIVE)
.experimental(false)
.date(date)
.kind(CapabilityStatementKind.INSTANCE.getCode())
.fhirVersion("4.0.1")
.experimental(false)
.addInstantiate(new Uri("http://hl7.org/fhir/CapabilityStatement/terminology-server"))
.software(Software.builder()
.name("Snow Owl©")
.version(serverVersion)
.build())
.version(softwareVersion)
.build())
.implementation(Implementation.builder()
.url("https://b2ihealthcare.com")
.description(description)
.build())
.build())
.addFormat(new Code(AbstractFhirController.APPLICATION_FHIR_JSON))
.addRest(restBuilder.build())
.build();

return holder;
}

private Date getDateFromQualifier(final String qualifier) {
if (StringUtils.isEmpty(qualifier) || "qualifier".equals(qualifier)) {
return Dates.todayGmt();
}

try {
return Dates.parse(qualifier, "yyyyMMddHHmm");
} catch (IllegalArgumentException e) {
return Dates.todayGmt();
}
}

private Collection<Resource> collectResources(final OpenAPI openAPI) {
final Paths paths = openAPI.getPaths();
final List<io.swagger.v3.oas.models.tags.Tag> tags = openAPI.getTags();
Expand Down