Skip to content

Commit

Permalink
use rasterio bounds() and from_bounds() to transform Box's
Browse files Browse the repository at this point in the history
remove usage of Box.normalize() since that should now be unnecessary
  • Loading branch information
AdeelH committed Nov 26, 2024
1 parent 51c9e60 commit df76d1f
Show file tree
Hide file tree
Showing 12 changed files with 159 additions and 61 deletions.
2 changes: 1 addition & 1 deletion rastervision_core/rastervision/core/box.py
Original file line number Diff line number Diff line change
Expand Up @@ -271,7 +271,7 @@ def to_shapely(self) -> Polygon:

def to_rasterio(self) -> RioWindow:
"""Convert to a Rasterio Window."""
return RioWindow.from_slices(*self.normalize().to_slices())
return RioWindow.from_slices(*self.to_slices())

def to_slices(self, h_step: int | None = None,
w_step: int | None = None) -> tuple[slice, slice]:
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -59,24 +59,18 @@ def map_to_pixel(self, inp, bbox: Box | None = None):
Coordinate-transformed input in the same format.
"""
if isinstance(inp, Box):
box_in = inp
ymin, xmin, ymax, xmax = box_in
xmin_tf, ymin_tf = self._map_to_pixel((xmin, ymin))
xmax_tf, ymax_tf = self._map_to_pixel((xmax, ymax))
box_out = Box(ymin_tf, xmin_tf, ymax_tf, xmax_tf)
box_out = self._map_to_pixel_box(inp)
if bbox is not None:
box_out = box_out.to_local_coords(bbox)
return box_out
elif isinstance(inp, BaseGeometry):
geom_in = inp
geom_out = transform(
lambda x, y, z=None: self._map_to_pixel((x, y)), geom_in)
geom_out = self._map_to_pixel_geom(inp)
if bbox is not None:
xmin, ymin = bbox.xmin, bbox.ymin
geom_out = translate(geom_out, xoff=-xmin, yoff=-ymin)
return geom_out
elif len(inp) == 2:
out = self._map_to_pixel(inp)
out = self._map_to_pixel_point(inp)
out_x, out_y = out
out = (np.array(out_x), np.array(out_y))
if bbox is not None:
Expand Down Expand Up @@ -128,25 +122,21 @@ def pixel_to_map(self, inp, bbox: Box | None = None):
box_in = inp
if bbox is not None:
box_in = box_in.to_global_coords(bbox)
ymin, xmin, ymax, xmax = box_in
xmin_tf, ymin_tf = self._pixel_to_map((xmin, ymin))
xmax_tf, ymax_tf = self._pixel_to_map((xmax, ymax))
box_out = Box(ymin_tf, xmin_tf, ymax_tf, xmax_tf)
box_out = self._pixel_to_map_box(box_in)
return box_out
elif isinstance(inp, BaseGeometry):
geom_in = inp
if bbox is not None:
xmin, ymin = bbox.xmin, bbox.ymin
geom_in = translate(geom_in, xoff=xmin, yoff=ymin)
geom_out = transform(
lambda x, y, z=None: self._pixel_to_map((x, y)), geom_in)
geom_out = self._pixel_to_map_geom(geom_in)
return geom_out
elif len(inp) == 2:
if bbox is not None:
xmin, ymin = bbox.xmin, bbox.ymin
inp_x, inp_y = inp
inp = (inp_x + xmin, inp_y + ymin)
out = self._pixel_to_map(inp)
out = self._pixel_to_map_point(inp)
out_x, out_y = out
out = (np.array(out_x), np.array(out_y))
return out
Expand All @@ -155,25 +145,87 @@ def pixel_to_map(self, inp, bbox: Box | None = None):
'Input must be 2-tuple or Box or shapely geometry.')

@abstractmethod
def _map_to_pixel(self, point: tuple[float, float]) -> tuple[int, int]:
"""Transform point from map to pixel coordinates.
def _map_to_pixel_point(self,
point: tuple[float, float]) -> tuple[int, int]:
"""Transform point(s) from map to pixel coordinates.
Args:
map_point: ``(x, y)`` tuple in map coordinates (eg. lon/lat). ``x``
and ``y`` can be single values or array-like.
Returns:
``(x, y)`` tuple in pixel coordinates.
"""

def _map_to_pixel_box(self, box: Box) -> Box:
"""Transform a :class:`Box` from map to pixel coordinates.
Args:
box: Box to transform.
Returns:
Box in pixel coordinates.
"""
ymin, xmin, ymax, xmax = box
xmin_tf, ymin_tf = self._map_to_pixel_point((xmin, ymin))
xmax_tf, ymax_tf = self._map_to_pixel_point((xmax, ymax))
pixel_box = Box(ymin_tf, xmin_tf, ymax_tf, xmax_tf)
return pixel_box

def _map_to_pixel_geom(self, geom: Box) -> Box:
"""Transform a shapely geom from map to pixel coordinates.
Args:
map_point: (x, y) tuple in map coordinates (eg. lon/lat). x and y
can be single values or array-like.
geom: Geom to transform.
Returns:
tuple[int, int]: (x, y) tuple in pixel coordinates.
Geom in pixel coordinates.
"""
pixel_geom = transform(
lambda x, y, z=None: self._map_to_pixel_point((x, y)),
geom,
)
return pixel_geom

@abstractmethod
def _pixel_to_map(self, point: tuple[int, int]) -> tuple[float, float]:
"""Transform point from pixel to map coordinates.
def _pixel_to_map_point(self,
point: tuple[int, int]) -> tuple[float, float]:
"""Transform point(s) from pixel to map coordinates.
Args:
pixel_point: ``(x, y)`` tuple in pixel coordinates. ``x`` and ``y``
can be single values or array-like.
Returns:
``(x, y)`` tuple in map coordinates (eg. lon/lat).
"""

def _pixel_to_map_box(self, box: Box) -> Box:
"""Transform a :class:`Box` from pixel to map coordinates.
Args:
box: Box to transform.
Returns:
Box in map coordinates (eg. lon/lat).
"""
ymin, xmin, ymax, xmax = box
xmin_tf, ymin_tf = self._pixel_to_map_point((xmin, ymin))
xmax_tf, ymax_tf = self._pixel_to_map_point((xmax, ymax))
map_box = Box(ymin_tf, xmin_tf, ymax_tf, xmax_tf)
return map_box

def _pixel_to_map_geom(self, geom: Box) -> Box:
"""Transform a shapely geom from pixel to map coordinates.
Args:
pixel_point: (x, y) tuple in pixel coordinates. x and y can be
single values or array-like.
geom: Geom to transform.
Returns:
tuple[float, float]: (x, y) tuple in map coordinates (eg. lon/lat).
Geom in map coordinates.
"""
map_geom = transform(
lambda x, y, z=None: self._pixel_to_map_point((x, y)),
geom,
)
return map_geom
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ class IdentityCRSTransformer(CRSTransformer):
This is useful for non-georeferenced imagery.
"""

def _map_to_pixel(self, map_point):
def _map_to_pixel_point(self, map_point):
"""Identity function.
Args:
Expand All @@ -18,7 +18,7 @@ def _map_to_pixel(self, map_point):
"""
return map_point

def _pixel_to_map(self, pixel_point):
def _pixel_to_map_point(self, pixel_point):
"""Identity function.
Args:
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -6,8 +6,10 @@
import numpy as np
import rasterio as rio
from rasterio.transform import (rowcol, xy)
from rasterio.windows import bounds, from_bounds, Window
from rasterio import Affine

from rastervision.core.box import Box
from rastervision.core.data.crs_transformer import (CRSTransformer,
IdentityCRSTransformer)

Expand All @@ -16,6 +18,9 @@

log = logging.getLogger(__name__)

PIXEL_PRECISION = 6
MAP_PRECISION = 6


def pyproj_wrapper(
func: Callable[..., tuple[Any, Any]],
Expand Down Expand Up @@ -54,18 +59,18 @@ class RasterioCRSTransformer(CRSTransformer):

def __init__(self,
transform: Affine,
image_crs: Any,
map_crs: Any = 'epsg:4326',
image_crs: str,
map_crs: str = 'epsg:4326',
round_pixels: bool = True):
"""Constructor.
Args:
transform (Affine): Rasterio affine transform.
image_crs (Any): CRS of image in format that PyProj can handle
eg. wkt or init string.
map_crs (Any): CRS of the labels. Defaults to "epsg:4326".
round_pixels (bool): If True, round outputs of map_to_pixel and
inputs of pixel_to_map to integers. Defaults to False.
transform: Rasterio affine transform.
image_crs: CRS of image in format that PyProj can handle eg. WKT or
init string.
map_crs: CRS of the labels. Defaults to "epsg:4326".
round_pixels: If ``True``, round outputs of :meth:`.map_to_pixel`.
Defaults to ``False``.
"""

if (image_crs is None) or (image_crs == map_crs):
Expand Down Expand Up @@ -106,7 +111,7 @@ def __repr__(self) -> str:
"""
return out

def _map_to_pixel(
def _map_to_pixel_point(
self,
map_point: tuple[float, float] | tuple[np.ndarray, np.ndarray]
) -> tuple[int, int] | tuple[np.ndarray, np.ndarray]:
Expand All @@ -120,14 +125,42 @@ def _map_to_pixel(
"""
image_point = self.map2image(*map_point)
x, y = image_point
row, col = rowcol(
self.transform, x, y, op=lambda x: np.round(x, PIXEL_PRECISION))
if self.round_pixels:
row, col = rowcol(self.transform, x, y)
else:
row, col = rowcol(self.transform, x, y, op=lambda x: x)
row, col = np.round(row), np.round(col)
pixel_point = (col, row)
return pixel_point

def _pixel_to_map(
def _map_to_pixel_box(self, box: Box) -> Box:
ymin, xmin, ymax, xmax = box
xmin, ymin = self.map2image(xmin, ymin)
xmax, ymax = self.map2image(xmax, ymax)
rio_window = from_bounds(
left=xmin,
bottom=ymin,
right=xmax,
top=ymax,
transform=self.transform,
)
(ymin, ymax), (xmin, xmax) = rio_window.toranges()
ymin, xmin, ymax, xmax = (
round(ymin, PIXEL_PRECISION),
round(xmin, PIXEL_PRECISION),
round(ymax, PIXEL_PRECISION),
round(xmax, PIXEL_PRECISION),
)
if self.round_pixels:
ymin, xmin, ymax, xmax = (
round(ymin),
round(xmin),
round(ymax),
round(xmax),
)
pixel_box = Box(ymin, xmin, ymax, xmax)
return pixel_box

def _pixel_to_map_point(
self, pixel_point: tuple[int, int] | tuple[np.ndarray, np.ndarray]
) -> tuple[float, float] | tuple[np.ndarray, np.ndarray]:
"""Transform point from pixel to map-based coordinates.
Expand All @@ -139,13 +172,24 @@ def _pixel_to_map(
(x, y) tuple in map coordinates
"""
col, row = pixel_point
if self.round_pixels:
col = col.astype(int) if isinstance(col, np.ndarray) else int(col)
row = row.astype(int) if isinstance(row, np.ndarray) else int(row)
image_point = xy(self.transform, row, col, offset='center')
map_point = self.image2map(*image_point)
x, y = xy(self.transform, row, col, offset='center')
map_point = self.image2map(x, y)
return map_point

def _pixel_to_map_box(self, box: Box) -> Box:
rio_window = Window(*box.to_xywh())
xmin, ymin, xmax, ymax = bounds(rio_window, transform=self.transform)
xmin, ymin, xmax, ymax = (
round(xmin, PIXEL_PRECISION),
round(ymin, PIXEL_PRECISION),
round(xmax, PIXEL_PRECISION),
round(ymax, PIXEL_PRECISION),
)
xmin, ymin = self.image2map(xmin, ymin)
xmax, ymax = self.image2map(xmax, ymax)
map_box = Box(ymin, xmin, ymax, xmax)
return map_box

@classmethod
def from_dataset(cls,
dataset: Any,
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -132,7 +132,7 @@ def from_stac(
crs_transformer = raster_sources[primary_source_idx].crs_transformer
if bbox_map_coords is not None:
bbox_map_coords = Box(*bbox_map_coords)
bbox = crs_transformer.map_to_pixel(bbox_map_coords).normalize()
bbox = crs_transformer.map_to_pixel(bbox_map_coords)
elif bbox is not None:
bbox = Box(*bbox)

Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -166,7 +166,7 @@ def get_chip_by_map_window(self, window_map_coords: 'Box', *args,
**kwargs) -> 'np.ndarray':
"""Same as get_chip(), but input is a window in map coords."""
window_pixel_coords = self.crs_transformer.map_to_pixel(
window_map_coords, bbox=self.bbox).normalize()
window_map_coords, bbox=self.bbox)
chip = self.get_chip(window_pixel_coords, *args, **kwargs)
return chip

Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -147,7 +147,7 @@ def from_stac(
bbox = Box(*bbox)
elif bbox_map_coords is not None:
bbox_map_coords = Box(*bbox_map_coords)
bbox = crs_transformer.map_to_pixel(bbox_map_coords).normalize()
bbox = crs_transformer.map_to_pixel(bbox_map_coords)
else:
bbox = None

Expand Down
2 changes: 1 addition & 1 deletion rastervision_core/rastervision/core/data/utils/rasterio.py
Original file line number Diff line number Diff line change
Expand Up @@ -100,7 +100,7 @@ def write_geotiff_like_geojson(path: str,
crs = 'epsg:4326'
crs_wkt = pyproj.CRS(crs).to_wkt()
geoms = unary_union(list(geojson_to_geoms(geojson)))
bbox = Box.from_shapely(geoms).normalize()
bbox = Box.from_shapely(geoms)
write_bbox(path, arr, bbox=bbox, crs_wkt=crs_wkt, **kwargs)


Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -14,8 +14,8 @@ def setUp(self):
self.im_path = data_file_path('3857.tif')
self.im_dataset = rasterio.open(self.im_path)
self.crs_trans = RasterioCRSTransformer.from_dataset(self.im_dataset)
self.lon_lat = (-115.3063715, 36.1268253)
self.pix_point = (50, 61)
self.lon_lat = (-115.306372, 36.126825)
self.pix_point = (51, 62)

def test_map_to_pixel_point(self):
# w/o bbox
Expand Down
4 changes: 2 additions & 2 deletions tests/core/data/mock_crs_transformer.py
Original file line number Diff line number Diff line change
Expand Up @@ -7,8 +7,8 @@ class DoubleCRSTransformer(CRSTransformer):
Assumes pixel coords are 2x map coords.
"""

def _map_to_pixel(self, map_point):
def _map_to_pixel_point(self, map_point):
return (map_point[0] * 2.0, map_point[1] * 2.0)

def _pixel_to_map(self, pixel_point):
def _pixel_to_map_point(self, pixel_point):
return (pixel_point[0] / 2.0, pixel_point[1] / 2.0)
8 changes: 6 additions & 2 deletions tests/core/data/raster_source/test_multi_raster_source.py
Original file line number Diff line number Diff line change
Expand Up @@ -244,10 +244,14 @@ def test_from_stac(self):

# test bbox_map_coords
bbox_map_coords = Box(
ymin=29.978710, xmin=31.134949, ymax=29.977309, xmax=31.136567)
ymin=29.977309,
xmin=31.134949,
ymax=29.978710,
xmax=31.136567,
)
rs = MultiRasterSource.from_stac(
item, assets=['red', 'green'], bbox_map_coords=bbox_map_coords)
self.assertEqual(rs.bbox, Box(ymin=50, xmin=50, ymax=206, xmax=206))
self.assertEqual(rs.bbox, Box(ymin=51, xmin=50, ymax=207, xmax=206))

# test error if both bbox and bbox_map_coords specified
args = dict(
Expand Down
Loading

0 comments on commit df76d1f

Please sign in to comment.