GitHub - ayushsengupta1991/CSE-549-Oxford_Nanopore_Basecalling: Implementation of Naive Bayes and SVM models for predicting Oxford Nanopore read base pairs from raw signal.

ayushsengupta1991 / CSE-549-Oxford_Nanopore_Basecalling Public

Implementation of Naive Bayes and SVM models for predicting Oxford Nanopore read base pairs from raw signal.

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Name		Name	Last commit message	Last commit date
Latest commit History 2 Commits
EditDistance(Point9)		EditDistance(Point9)
NaiveBayes		NaiveBayes
NaiveBayesResults		NaiveBayesResults
Result		Result
TestingFolder		TestingFolder
TrainingFolder		TrainingFolder
aligned_files/alignedfasta_files		aligned_files/alignedfasta_files
alignedfasta_files		alignedfasta_files
bayes		bayes
blast		blast
count_classes		count_classes
f1_score		f1_score
histogram		histogram
new_files		new_files
parse_file		parse_file
report		report
results		results
svm/decoding_svm_classes		svm/decoding_svm_classes
testing_alignedfasta		testing_alignedfasta
testing_bayes		testing_bayes
training_bayes		training_bayes
NaiveBayes.jar		NaiveBayes.jar
RemoveGap$1.class		RemoveGap$1.class
RemoveGap.class		RemoveGap.class
RemoveGap.java		RemoveGap.java
a.out		a.out
checklist.docx		checklist.docx
divide_dataset.sh		divide_dataset.sh
extractFeature		extractFeature
final_report.pdf		final_report.pdf
hist.ods		hist.ods
integratedscript.pl		integratedscript.pl
merged_features.nsvm		merged_features.nsvm
merged_testing.nsvm		merged_testing.nsvm
move_files.sh		move_files.sh
normalization		normalization
normalization.cpp		normalization.cpp
readme.md		readme.md
reads_to_events.cpp		reads_to_events.cpp
removeFiles.sh		removeFiles.sh