This repository has been archived by the owner on Aug 9, 2023. It is now read-only.
Add EFS support in Nextflow and other minor changes #169
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
wleepang
reviewed
Jun 3, 2021
wleepang
reviewed
Jun 3, 2021
|
@wleepang think this is ready for you. updated the SSM parameter to none and then do a check for it in the user data script. have confirmed that when the param is none, it mounts no EFS and when the param is set to the EFS ID it mounts correctly. I've confirmed it runs as expected with the metagenomics pipeline I have |
wleepang
reviewed
Jun 5, 2021
|
doh! that's what I get for testing in |
Sign up for free
to subscribe to this conversation on GitHub.
Already have an account?
Sign in.
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Issue #, if available:
#161
Description of changes:
GWFCoreNextflow Resourcesgp2togp3by defaultBy submitting this pull request, I confirm that you can use, modify, copy, and redistribute this contribution, under the terms of your choice.