Wp #61
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Wp #61
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auton_survival/phenotyping.py
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| The names of categorical independent variables inputed as python strings in a list | ||
| num_vars : list of python str(s), default=None | ||
| The names of continuous independent variables inputed as python strings in a list | ||
| num_vars_quantiles : int or list-like of float, default=(0, .5, 1.0) |
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| return phenotypes | ||
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| def _rename(self, phenotypes): |
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helper function to rename the phenotype names
auton_survival/phenotyping.py
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| """Phenotyper that performs dimensionality reduction followed by clustering. | ||
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| """Phenotyper that performs dimensionality reduction followed by clustering. Learned clusters are considered phenotypes and used to | ||
| group samples based on similar observable characteristics. |
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ed on similarity in covariate space
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Doc strings for phenotyping.py, metrics.py, and estimators.py