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talipot-python: Fix compilation and runtime errors with Python 3.13 #356

talipot-python: Fix compilation and runtime errors with Python 3.13

talipot-python: Fix compilation and runtime errors with Python 3.13 #356

Workflow file for this run

name: code-coverage
on: [push, pull_request]
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
jobs:
ubuntu:
name: Talipot C++ code coverage
runs-on: ubuntu-latest
steps:
- name: Checkout Talipot code
uses: actions/checkout@v4
- name: Apt update
run: sudo apt update
- name: Install Talipot build dependencies
run: sudo apt install
cmake
ccache
ninja-build
libqhull-dev
libyajl-dev
libgraphviz-dev
libpython3-dev
libcppunit-dev
binutils-dev
libzstd-dev
libgit2-dev
qtbase5-dev
libquazip5-dev
libglew-dev
libfreetype6-dev
libfribidi-dev
libfontconfig-dev
python3
python3-pip
doxygen
graphviz
xvfb
- name: Install sip
run: |
sudo pip3 install --upgrade pip
sudo pip3 install sip
- name: Prepare ccache timestamp
id: get-current-date
run: |
echo "date=$(date -u "+%Y-%m-%d-%H-%m-%S")" >> $GITHUB_OUTPUT
shell: bash
- name: Cache files
uses: actions/cache@v4
with:
path: ~/.ccache
key: ${{ matrix.config.os }}-ccache-${{ steps.get-current-date.outputs.date }}
restore-keys: |
${{ matrix.config.os }}-ccache-
save-always: true
- name: Create build directory
run: mkdir build
- name: Configure Talipot build with CMake
working-directory: ./build
run: cmake .. -G Ninja
-DCMAKE_BUILD_TYPE=Release
-DCMAKE_INSTALL_PREFIX=$PWD/install
-DTALIPOT_BUILD_TESTS=ON
-DTALIPOT_USE_CCACHE=ON
-DTALIPOT_BUILD_DOC=OFF
-DTALIPOT_CODE_COVERAGE=ON
- name: Talipot build
working-directory: ./build
run: ninja -j4
- name: Run Talipot unit tests
working-directory: ./build
run: xvfb-run ninja tests
- name: Generate and upload code coverage report
uses: threeal/gcovr-action@main
with:
excludes: |
build/*
library/talipot-gui/*
library/talipot-ogl/*
library/talipot-python/*
plugins/interactor/*
plugins/view/*
software/*
tests/*
thirdparty/*
utils/*
coveralls-send: true
github-token: ${{ secrets.GITHUB_TOKEN }}