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1. ORFanage ORFanage Public

   Ultra-efficient and sensitive method to search for Open Reading Frames in spliced genomes guided by reference annotation to maximize protein similarity within genes.

   C++ 23 2

2. salzberg-lab/bolotie salzberg-lab/bolotie Public

   SARS-CoV-2: detecting recombinations in viruses using large data sets with high sequence similarity

   C++ 13 4

3. tiebrush tiebrush Public

   Forked from gpertea/tiebrush

   Summarize and filter read alignments from multiple sequencing samples (taken as sorted BAM files)

   C++ 16 2

4. chess-genome/chess chess-genome/chess Public

   Comprehensive Human Expressed SequenceS

   16 2

5. SIM2SAM SIM2SAM Public

   conversion of raw polyester FASTA output to SAM in genomic coordinates

   C++ 1

6. translacc translacc Public

   Small independent tracker for the JHU transloc services to keep count of the missed shuttles and the total lateness each day

   Python 1