lxml fails to build or install from pip #11505

skarczjh · 2025-01-29T23:25:11Z

Description

For some reason, lxml is being built when installed from pip rather than pulling the whl. As it is trying to be built, it fails on both 22.04 and 24.04:

Building wheels for collected packages: lxml
  Building wheel for lxml (pyproject.toml): started
  Building wheel for lxml (pyproject.toml): finished with status 'error'
  error: subprocess-exited-with-error
  
  × Building wheel for lxml (pyproject.toml) did not run successfully.
  │ exit code: 1
  ╰─> [175 lines of output]
      <string>:67: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html
      Building lxml version 4.9.4.
      Building without Cython.
      Building against libxml2 2.9.14 and libxslt 1.1.39
      running bdist_wheel
      running build
      running build_py
      creating build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/builder.py -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/_elementpath.py -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/usedoctest.py -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/ElementInclude.py -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/cssselect.py -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/__init__.py -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/pyclasslookup.py -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/sax.py -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/doctestcompare.py -> build/lib.linux-x86_64-cpython-313/lxml
      creating build/lib.linux-x86_64-cpython-313/lxml/includes
      copying src/lxml/includes/__init__.py -> build/lib.linux-x86_64-cpython-313/lxml/includes
      creating build/lib.linux-x86_64-cpython-313/lxml/html
      copying src/lxml/html/builder.py -> build/lib.linux-x86_64-cpython-313/lxml/html
      copying src/lxml/html/html5parser.py -> build/lib.linux-x86_64-cpython-313/lxml/html
      copying src/lxml/html/formfill.py -> build/lib.linux-x86_64-cpython-313/lxml/html
      copying src/lxml/html/usedoctest.py -> build/lib.linux-x86_64-cpython-313/lxml/html
      copying src/lxml/html/_diffcommand.py -> build/lib.linux-x86_64-cpython-313/lxml/html
      copying src/lxml/html/defs.py -> build/lib.linux-x86_64-cpython-313/lxml/html
      copying src/lxml/html/diff.py -> build/lib.linux-x86_64-cpython-313/lxml/html
      copying src/lxml/html/ElementSoup.py -> build/lib.linux-x86_64-cpython-313/lxml/html
      copying src/lxml/html/_setmixin.py -> build/lib.linux-x86_64-cpython-313/lxml/html
      copying src/lxml/html/clean.py -> build/lib.linux-x86_64-cpython-313/lxml/html
      copying src/lxml/html/__init__.py -> build/lib.linux-x86_64-cpython-313/lxml/html
      copying src/lxml/html/_html5builder.py -> build/lib.linux-x86_64-cpython-313/lxml/html
      copying src/lxml/html/soupparser.py -> build/lib.linux-x86_64-cpython-313/lxml/html
      creating build/lib.linux-x86_64-cpython-313/lxml/isoschematron
      copying src/lxml/isoschematron/__init__.py -> build/lib.linux-x86_64-cpython-313/lxml/isoschematron
      copying src/lxml/etree.h -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/etree_api.h -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/lxml.etree.h -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/lxml.etree_api.h -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/etree.pyx -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/objectify.pyx -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/xpath.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/relaxng.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/docloader.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/schematron.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/xsltext.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/dtd.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/xinclude.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/parser.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/xslt.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/readonlytree.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/public-api.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/objectpath.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/proxy.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/parsertarget.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/xmlerror.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/extensions.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/cleanup.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/classlookup.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/xmlid.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/iterparse.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/saxparser.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/serializer.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/apihelpers.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/nsclasses.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/xmlschema.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/debug.pxi -> build/lib.linux-x86_64-cpython-313/lxml
      copying src/lxml/includes/xinclude.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
      copying src/lxml/includes/__init__.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
      copying src/lxml/includes/c14n.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
      copying src/lxml/includes/etreepublic.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
      copying src/lxml/includes/tree.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
      copying src/lxml/includes/xmlerror.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
      copying src/lxml/includes/config.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
      copying src/lxml/includes/uri.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
      copying src/lxml/includes/schematron.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
      copying src/lxml/includes/xpath.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
      copying src/lxml/includes/xslt.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
      copying src/lxml/includes/dtdvalid.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
      copying src/lxml/includes/xmlparser.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
      copying src/lxml/includes/xmlschema.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
      copying src/lxml/includes/relaxng.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
      copying src/lxml/includes/htmlparser.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
      copying src/lxml/includes/lxml-version.h -> build/lib.linux-x86_64-cpython-313/lxml/includes
      copying src/lxml/includes/etree_defs.h -> build/lib.linux-x86_64-cpython-313/lxml/includes
      creating build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/rng
      copying src/lxml/isoschematron/resources/rng/iso-schematron.rng -> build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/rng
      creating build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/xsl
      copying src/lxml/isoschematron/resources/xsl/XSD2Schtrn.xsl -> build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/xsl
      copying src/lxml/isoschematron/resources/xsl/RNG2Schtrn.xsl -> build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/xsl
      creating build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
      copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_abstract_expand.xsl -> build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
      copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_schematron_message.xsl -> build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
      copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_schematron_skeleton_for_xslt1.xsl -> build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
      copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_dsdl_include.xsl -> build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
      copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_svrl_for_xslt1.xsl -> build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
      copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/readme.txt -> build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
      running build_ext
      building 'lxml.etree' extension
      creating build/temp.linux-x86_64-cpython-313/src/lxml
      gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O3 -Wall -fPIC -DCYTHON_CLINE_IN_TRACEBACK=0 -I/usr/include/libxml2 -Isrc -Isrc/lxml/includes -I/opt/hostedtoolcache/Python/3.13.1/x64/include/python3.13 -c src/lxml/etree.c -o build/temp.linux-x86_64-cpython-313/src/lxml/etree.o -w
      src/lxml/etree.c: In function ‘__Pyx_init_assertions_enabled’:
      src/lxml/etree.c:5988:105: error: invalid type argument of ‘->’ (have ‘int’)
       5988 |     __pyx_assertions_enabled_flag = ! _PyInterpreterState_GetConfig(__Pyx_PyThreadState_Current->interp)->optimization_level;
            |                                                                                                         ^~
      src/lxml/etree.c: In function ‘__Pyx_PyIter_Next2’:
      src/lxml/etree.c:265[182](https://github.com/jkhy/jhdocs/actions/runs/13042005632/job/36385715589#step:8:183):35: error: ‘_PyObject_NextNotImplemented’ undeclared (first use in this function); did you mean ‘PyObject_HashNotImplemented’?
      265182 |         if (unlikely(iternext == &_PyObject_NextNotImplemented))
             |                                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
      src/lxml/etree.c:1096:43: note: in definition of macro ‘unlikely’
       1096 |   #define unlikely(x) __builtin_expect(!!(x), 0)
            |                                           ^
      src/lxml/etree.c:265182:35: note: each undeclared identifier is reported only once for each function it appears in
      265182 |         if (unlikely(iternext == &_PyObject_NextNotImplemented))
             |                                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
      src/lxml/etree.c:1096:43: note: in definition of macro ‘unlikely’
       1096 |   #define unlikely(x) __builtin_expect(!!(x), 0)
            |                                           ^
      src/lxml/etree.c: In function ‘__Pyx_PyInt_As_int’:
      src/lxml/etree.c:269066:27: error: too few arguments to function ‘_PyLong_AsByteArray’
      269066 |                 int ret = _PyLong_AsByteArray((PyLongObject *)v,
             |                           ^~~~~~~~~~~~~~~~~~~
      In file included from /opt/hostedtoolcache/Python/3.13.1/x64/include/python3.13/longobject.h:107,
                       from /opt/hostedtoolcache/Python/3.13.1/x64/include/python3.13/Python.h:81,
                       from src/lxml/etree.c:96:
      /opt/hostedtoolcache/Python/3.13.1/x64/include/python3.13/cpython/longobject.h:111:17: note: declared here
        111 | PyAPI_FUNC(int) _PyLong_AsByteArray(PyLongObject* v,
            |                 ^~~~~~~~~~~~~~~~~~~
      src/lxml/etree.c: In function ‘__Pyx_PyInt_As_size_t’:
      src/lxml/etree.c:269375:27: error: too few arguments to function ‘_PyLong_AsByteArray’
      269375 |                 int ret = _PyLong_AsByteArray((PyLongObject *)v,
             |                           ^~~~~~~~~~~~~~~~~~~
      /opt/hostedtoolcache/Python/3.13.1/x64/include/python3.13/cpython/longobject.h:111:17: note: declared here
        111 | PyAPI_FUNC(int) _PyLong_AsByteArray(PyLongObject* v,
            |                 ^~~~~~~~~~~~~~~~~~~
      src/lxml/etree.c: In function ‘__Pyx_PyInt_As_unsigned_int’:
      src/lxml/etree.c:269571:27: error: too few arguments to function ‘_PyLong_AsByteArray’
      269571 |                 int ret = _PyLong_AsByteArray((PyLongObject *)v,
             |                           ^~~~~~~~~~~~~~~~~~~
      /opt/hostedtoolcache/Python/3.13.1/x64/include/python3.13/cpython/longobject.h:111:17: note: declared here
        111 | PyAPI_FUNC(int) _PyLong_AsByteArray(PyLongObject* v,
            |                 ^~~~~~~~~~~~~~~~~~~
      src/lxml/etree.c: In function ‘__Pyx_PyInt_As_signed__char’:
      src/lxml/etree.c:269767:27: error: too few arguments to function ‘_PyLong_AsByteArray’
      269767 |                 int ret = _PyLong_AsByteArray((PyLongObject *)v,
             |                           ^~~~~~~~~~~~~~~~~~~
      /opt/hostedtoolcache/Python/3.13.1/x64/include/python3.13/cpython/longobject.h:111:17: note: declared here
        111 | PyAPI_FUNC(int) _PyLong_AsByteArray(PyLongObject* v,
            |                 ^~~~~~~~~~~~~~~~~~~
      src/lxml/etree.c: In function ‘__Pyx_PyInt_As_unsigned_short’:
      src/lxml/etree.c:270001:27: error: too few arguments to function ‘_PyLong_AsByteArray’
      270001 |                 int ret = _PyLong_AsByteArray((PyLongObject *)v,
             |                           ^~~~~~~~~~~~~~~~~~~
      /opt/hostedtoolcache/Python/3.13.1/x64/include/python3.13/cpython/longobject.h:111:17: note: declared here
        111 | PyAPI_FUNC(int) _PyLong_AsByteArray(PyLongObject* v,
            |                 ^~~~~~~~~~~~~~~~~~~
      src/lxml/etree.c: In function ‘__Pyx_PyInt_As_xmlChar’:
      src/lxml/etree.c:270235:27: error: too few arguments to function ‘_PyLong_AsByteArray’
      270[235](https://github.com/jkhy/jhdocs/actions/runs/13042005632/job/36385715589#step:8:236) |                 int ret = _PyLong_AsByteArray((PyLongObject *)v,
             |                           ^~~~~~~~~~~~~~~~~~~
      /opt/hostedtoolcache/Python/3.13.1/x64/include/python3.13/cpython/longobject.h:111:17: note: declared here
        111 | PyAPI_FUNC(int) _PyLong_AsByteArray(PyLongObject* v,
            |                 ^~~~~~~~~~~~~~~~~~~
      src/lxml/etree.c: In function ‘__Pyx_PyInt_As_long’:
      src/lxml/etree.c:270438:27: error: too few arguments to function ‘_PyLong_AsByteArray’
      270438 |                 int ret = _PyLong_AsByteArray((PyLongObject *)v,
             |                           ^~~~~~~~~~~~~~~~~~~
      /opt/hostedtoolcache/Python/3.13.1/x64/include/python3.13/cpython/longobject.h:111:17: note: declared here
        111 | PyAPI_FUNC(int) _PyLong_AsByteArray(PyLongObject* v,
            |                 ^~~~~~~~~~~~~~~~~~~
      Compile failed: command '/usr/bin/gcc' failed with exit code 1
      creating tmp
      cc -I/usr/include/libxml2 -I/usr/include/libxml2 -c /tmp/xmlXPathInitpn93mbpd.c -o tmp/xmlXPathInitpn93mbpd.o
      cc tmp/xmlXPathInitpn93mbpd.o -lxml2 -o a.out
      error: command '/usr/bin/gcc' failed with exit code 1
      [end of output]
  
  note: This error originates from a subprocess, and is likely not a problem with pip.
  ERROR: Failed building wheel for lxml
Failed to build lxml
ERROR: Failed to build installable wheels for some pyproject.toml based projects (lxml)

Platforms affected

Azure DevOps
GitHub Actions - Standard Runners
GitHub Actions - Larger Runners

Runner images affected

Image version and build link

Version: 20250126.1.0

Is it regression?

Yes, Version: 20250120.5.0 didn't have this behavior

Expected behavior

2025-01-28T21:18:29.3236842Z Collecting lxml<5.0.0,>=4.9.0 (from mkdocs-drawio-file->-r requirements.txt (line 3))
2025-01-28T21:18:29.3280300Z   Downloading lxml-4.9.4-cp312-cp312-manylinux_2_28_x86_64.whl.metadata (3.7 kB)
``

### Actual behavior

Building wheels for collected packages: lxml
Building wheel for lxml (pyproject.toml): started
Building wheel for lxml (pyproject.toml): finished with status 'error'
error: subprocess-exited-with-error

× Building wheel for lxml (pyproject.toml) did not run successfully.
│ exit code: 1
╰─> [175 lines of output]
:67: DeprecationWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html
Building lxml version 4.9.4.
Building without Cython.
Building against libxml2 2.9.14 and libxslt 1.1.39
running bdist_wheel
running build
running build_py
creating build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/builder.py -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/_elementpath.py -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/usedoctest.py -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/ElementInclude.py -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/cssselect.py -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/init.py -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/pyclasslookup.py -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/sax.py -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/doctestcompare.py -> build/lib.linux-x86_64-cpython-313/lxml
creating build/lib.linux-x86_64-cpython-313/lxml/includes
copying src/lxml/includes/init.py -> build/lib.linux-x86_64-cpython-313/lxml/includes
creating build/lib.linux-x86_64-cpython-313/lxml/html
copying src/lxml/html/builder.py -> build/lib.linux-x86_64-cpython-313/lxml/html
copying src/lxml/html/html5parser.py -> build/lib.linux-x86_64-cpython-313/lxml/html
copying src/lxml/html/formfill.py -> build/lib.linux-x86_64-cpython-313/lxml/html
copying src/lxml/html/usedoctest.py -> build/lib.linux-x86_64-cpython-313/lxml/html
copying src/lxml/html/_diffcommand.py -> build/lib.linux-x86_64-cpython-313/lxml/html
copying src/lxml/html/defs.py -> build/lib.linux-x86_64-cpython-313/lxml/html
copying src/lxml/html/diff.py -> build/lib.linux-x86_64-cpython-313/lxml/html
copying src/lxml/html/ElementSoup.py -> build/lib.linux-x86_64-cpython-313/lxml/html
copying src/lxml/html/_setmixin.py -> build/lib.linux-x86_64-cpython-313/lxml/html
copying src/lxml/html/clean.py -> build/lib.linux-x86_64-cpython-313/lxml/html
copying src/lxml/html/init.py -> build/lib.linux-x86_64-cpython-313/lxml/html
copying src/lxml/html/_html5builder.py -> build/lib.linux-x86_64-cpython-313/lxml/html
copying src/lxml/html/soupparser.py -> build/lib.linux-x86_64-cpython-313/lxml/html
creating build/lib.linux-x86_64-cpython-313/lxml/isoschematron
copying src/lxml/isoschematron/init.py -> build/lib.linux-x86_64-cpython-313/lxml/isoschematron
copying src/lxml/etree.h -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/etree_api.h -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/lxml.etree.h -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/lxml.etree_api.h -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/etree.pyx -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/objectify.pyx -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/xpath.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/relaxng.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/docloader.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/schematron.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/xsltext.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/dtd.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/xinclude.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/parser.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/xslt.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/readonlytree.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/public-api.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/objectpath.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/proxy.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/parsertarget.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/xmlerror.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/extensions.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/cleanup.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/classlookup.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/xmlid.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/iterparse.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/saxparser.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/serializer.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/apihelpers.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/nsclasses.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/xmlschema.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/debug.pxi -> build/lib.linux-x86_64-cpython-313/lxml
copying src/lxml/includes/xinclude.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
copying src/lxml/includes/init.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
copying src/lxml/includes/c14n.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
copying src/lxml/includes/etreepublic.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
copying src/lxml/includes/tree.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
copying src/lxml/includes/xmlerror.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
copying src/lxml/includes/config.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
copying src/lxml/includes/uri.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
copying src/lxml/includes/schematron.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
copying src/lxml/includes/xpath.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
copying src/lxml/includes/xslt.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
copying src/lxml/includes/dtdvalid.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
copying src/lxml/includes/xmlparser.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
copying src/lxml/includes/xmlschema.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
copying src/lxml/includes/relaxng.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
copying src/lxml/includes/htmlparser.pxd -> build/lib.linux-x86_64-cpython-313/lxml/includes
copying src/lxml/includes/lxml-version.h -> build/lib.linux-x86_64-cpython-313/lxml/includes
copying src/lxml/includes/etree_defs.h -> build/lib.linux-x86_64-cpython-313/lxml/includes
creating build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/rng
copying src/lxml/isoschematron/resources/rng/iso-schematron.rng -> build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/rng
creating build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/xsl
copying src/lxml/isoschematron/resources/xsl/XSD2Schtrn.xsl -> build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/xsl
copying src/lxml/isoschematron/resources/xsl/RNG2Schtrn.xsl -> build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/xsl
creating build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_abstract_expand.xsl -> build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_schematron_message.xsl -> build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_schematron_skeleton_for_xslt1.xsl -> build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_dsdl_include.xsl -> build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/iso_svrl_for_xslt1.xsl -> build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
copying src/lxml/isoschematron/resources/xsl/iso-schematron-xslt1/readme.txt -> build/lib.linux-x86_64-cpython-313/lxml/isoschematron/resources/xsl/iso-schematron-xslt1
running build_ext
building 'lxml.etree' extension
creating build/temp.linux-x86_64-cpython-313/src/lxml
gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O3 -Wall -fPIC -DCYTHON_CLINE_IN_TRACEBACK=0 -I/usr/include/libxml2 -Isrc -Isrc/lxml/includes -I/opt/hostedtoolcache/Python/3.13.1/x64/include/python3.13 -c src/lxml/etree.c -o build/temp.linux-x86_64-cpython-313/src/lxml/etree.o -w
src/lxml/etree.c: In function ‘__Pyx_init_assertions_enabled’:
src/lxml/etree.c:5988:105: error: invalid type argument of ‘->’ (have ‘int’)
5988 | __pyx_assertions_enabled_flag = ! _PyInterpreterState_GetConfig(__Pyx_PyThreadState_Current->interp)->optimization_level;
| ^~
src/lxml/etree.c: In function ‘__Pyx_PyIter_Next2’:
src/lxml/etree.c:265182:35: error: ‘_PyObject_NextNotImplemented’ undeclared (first use in this function); did you mean ‘PyObject_HashNotImplemented’?
265182 | if (unlikely(iternext == &_PyObject_NextNotImplemented))
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/lxml/etree.c:1096:43: note: in definition of macro ‘unlikely’
1096 | #define unlikely(x) __builtin_expect(!!(x), 0)
| ^
src/lxml/etree.c:265182:35: note: each undeclared identifier is reported only once for each function it appears in
265182 | if (unlikely(iternext == &_PyObject_NextNotImplemented))
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
src/lxml/etree.c:1096:43: note: in definition of macro ‘unlikely’
1096 | #define unlikely(x) __builtin_expect(!!(x), 0)
| ^
src/lxml/etree.c: In function ‘__Pyx_PyInt_As_int’:
src/lxml/etree.c:269066:27: error: too few arguments to function ‘_PyLong_AsByteArray’
269066 | int ret = _PyLong_AsByteArray((PyLongObject )v,
| ^~~~~~~~~~~~~~~~~~~
In file included from /opt/hostedtoolcache/Python/3.13.1/x64/include/python3.13/longobject.h:107,
from /opt/hostedtoolcache/Python/3.13.1/x64/include/python3.13/Python.h:81,
from src/lxml/etree.c:96:
/opt/hostedtoolcache/Python/3.13.1/x64/include/python3.13/cpython/longobject.h:111:17: note: declared here
111 | PyAPI_FUNC(int) _PyLong_AsByteArray(PyLongObject v,
| ^~~~~~~~~~~~~~~~~~~
src/lxml/etree.c: In function ‘__Pyx_PyInt_As_size_t’:
src/lxml/etree.c:269375:27: error: too few arguments to function ‘_PyLong_AsByteArray’
269375 | int ret = _PyLong_AsByteArray((PyLongObject )v,
| ^~~~~~~~~~~~~~~~~~~
/opt/hostedtoolcache/Python/3.13.1/x64/include/python3.13/cpython/longobject.h:111:17: note: declared here
111 | PyAPI_FUNC(int) _PyLong_AsByteArray(PyLongObject v,
| ^~~~~~~~~~~~~~~~~~~
src/lxml/etree.c: In function ‘__Pyx_PyInt_As_unsigned_int’:
src/lxml/etree.c:269571:27: error: too few arguments to function ‘_PyLong_AsByteArray’
269571 | int ret = _PyLong_AsByteArray((PyLongObject )v,
| ^~~~~~~~~~~~~~~~~~~
/opt/hostedtoolcache/Python/3.13.1/x64/include/python3.13/cpython/longobject.h:111:17: note: declared here
111 | PyAPI_FUNC(int) _PyLong_AsByteArray(PyLongObject v,
| ^~~~~~~~~~~~~~~~~~~
src/lxml/etree.c: In function ‘__Pyx_PyInt_As_signed__char’:
src/lxml/etree.c:269767:27: error: too few arguments to function ‘_PyLong_AsByteArray’
269767 | int ret = _PyLong_AsByteArray((PyLongObject )v,
| ^~~~~~~~~~~~~~~~~~~
/opt/hostedtoolcache/Python/3.13.1/x64/include/python3.13/cpython/longobject.h:111:17: note: declared here
111 | PyAPI_FUNC(int) _PyLong_AsByteArray(PyLongObject v,
| ^~~~~~~~~~~~~~~~~~~
src/lxml/etree.c: In function ‘__Pyx_PyInt_As_unsigned_short’:
src/lxml/etree.c:270001:27: error: too few arguments to function ‘_PyLong_AsByteArray’
270001 | int ret = _PyLong_AsByteArray((PyLongObject )v,
| ^~~~~~~~~~~~~~~~~~~
/opt/hostedtoolcache/Python/3.13.1/x64/include/python3.13/cpython/longobject.h:111:17: note: declared here
111 | PyAPI_FUNC(int) _PyLong_AsByteArray(PyLongObject v,
| ^~~~~~~~~~~~~~~~~~~
src/lxml/etree.c: In function ‘__Pyx_PyInt_As_xmlChar’:
src/lxml/etree.c:270235:27: error: too few arguments to function ‘_PyLong_AsByteArray’
270235 | int ret = _PyLong_AsByteArray((PyLongObject )v,
| ^~~~~~~~~~~~~~~~~~~
/opt/hostedtoolcache/Python/3.13.1/x64/include/python3.13/cpython/longobject.h:111:17: note: declared here
111 | PyAPI_FUNC(int) _PyLong_AsByteArray(PyLongObject v,
| ^~~~~~~~~~~~~~~~~~~
src/lxml/etree.c: In function ‘__Pyx_PyInt_As_long’:
src/lxml/etree.c:270438:27: error: too few arguments to function ‘_PyLong_AsByteArray’
270438 | int ret = _PyLong_AsByteArray((PyLongObject )v,
| ^~~~~~~~~~~~~~~~~~~
/opt/hostedtoolcache/Python/3.13.1/x64/include/python3.13/cpython/longobject.h:111:17: note: declared here
111 | PyAPI_FUNC(int) _PyLong_AsByteArray(PyLongObject v,
| ^~~~~~~~~~~~~~~~~~~
Compile failed: command '/usr/bin/gcc' failed with exit code 1
creating tmp
cc -I/usr/include/libxml2 -I/usr/include/libxml2 -c /tmp/xmlXPathInitpn93mbpd.c -o tmp/xmlXPathInitpn93mbpd.o
cc tmp/xmlXPathInitpn93mbpd.o -lxml2 -o a.out
error: command '/usr/bin/gcc' failed with exit code 1
[end of output]


### Repro steps

Build mkdocs via GitHub Actions with drawio plugin.

The text was updated successfully, but these errors were encountered:

RaviAkshintala · 2025-01-30T03:16:08Z

Hi @skarczjh Thank you for bringing this issue to our attention. We will look into this issue closely and will update you after investigating.

RaviAkshintala · 2025-01-30T03:18:16Z

@skarczjh The issue is with lxml version 4.9.0. Please upgrade to the latest version, 5.3.0, as it will resolve the issue. Thanks.

elmbeech · 2025-02-01T23:15:55Z

thank you @skarczjh and @RaviAkshintala .
you made my day!

see actions/runner-images#11505 Signed-off-by: AXM Software <[email protected]>

vidyasagarnimmagaddi · 2025-02-04T08:49:47Z

Hi @skarczjh , could you please confirm whether the issue is resolved updating lxml latest version 5.3.0 .thanks

elmbeech · 2025-02-04T16:11:45Z

@vidyasagarnimmagaddi yes it is resolved!

elstak · 2025-02-05T10:41:09Z

@elmbeech, how did you do that? mkdocs-drawio-file explicitly requires version 4.9.x version: Collecting lxml<5.0.0,>=4.9.0

elmbeech · 2025-02-05T16:00:07Z

hi @elstak ,

in the workflow yml file i could set it like bleow.
so maybe you can try "lxml=4.9.0" because the error occurred with 4.9.4.
not sure if you find a workaround, or so to say, if it works with one of the 4 other possible versions.
you have to give a try.

elstak · 2025-02-06T07:44:45Z

Thanks, @elmbeech . I tried with 4.9.0 instead of 4.9.4 but it didn't work. I could solve it forcing python 3.12 instead of the latest 3.13.

vidyasagarnimmagaddi · 2025-02-06T09:48:22Z

Hi @elmbeech , Thanks for confirming, closing this issue.

skarczjh added bug report needs triage labels Jan 29, 2025

RaviAkshintala self-assigned this Jan 30, 2025

RaviAkshintala added OS: Ubuntu and removed needs triage labels Jan 30, 2025

axmsoftware added a commit to OpenLEADR/openleadr-python that referenced this issue Feb 3, 2025

Update test-suite.yml lxml==5.3.0

f83e69c

see actions/runner-images#11505 Signed-off-by: AXM Software <[email protected]>

vidyasagarnimmagaddi closed this as completed Feb 6, 2025

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lxml fails to build or install from pip #11505

lxml fails to build or install from pip #11505

skarczjh commented Jan 29, 2025

RaviAkshintala commented Jan 30, 2025

RaviAkshintala commented Jan 30, 2025

elmbeech commented Feb 1, 2025

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elmbeech commented Feb 4, 2025

elstak commented Feb 5, 2025 •

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elmbeech commented Feb 5, 2025 •

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elstak commented Feb 6, 2025

vidyasagarnimmagaddi commented Feb 6, 2025

lxml fails to build or install from pip #11505

lxml fails to build or install from pip #11505

Comments

skarczjh commented Jan 29, 2025

Description

Platforms affected

Runner images affected

Image version and build link

Is it regression?

Expected behavior

RaviAkshintala commented Jan 30, 2025

RaviAkshintala commented Jan 30, 2025

elmbeech commented Feb 1, 2025

vidyasagarnimmagaddi commented Feb 4, 2025

elmbeech commented Feb 4, 2025

elstak commented Feb 5, 2025 • edited Loading

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elstak commented Feb 6, 2025

vidyasagarnimmagaddi commented Feb 6, 2025

elstak commented Feb 5, 2025 •

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elmbeech commented Feb 5, 2025 •

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