Skip to content

Commit

Permalink
Docs: manual update (release date and citations order)
Browse files Browse the repository at this point in the history
  • Loading branch information
alexeigurevich committed Jan 26, 2018
1 parent 7aaee01 commit 6564c26
Showing 1 changed file with 14 additions and 12 deletions.
26 changes: 14 additions & 12 deletions manual.html
Original file line number Diff line number Diff line change
Expand Up @@ -99,7 +99,7 @@ <h1>QUAST 4.6.2 manual</h1>
for guidelines on how to complete the licensing process.
<br>
<br>
Version 4.6.2 of QUAST was released under GPL v2 on 25 January 2018. Note that some of build-in third-party tools are not under GPL v2. See <a href="LICENSE.txt">LICENSE</a> for details.
Version 4.6.2 of QUAST was released under GPL v2 on 26 January 2018. Note that some of build-in third-party tools are not under GPL v2. See <a href="LICENSE.txt">LICENSE</a> for details.
</p>

<h2>Contents</h2>
Expand Down Expand Up @@ -1146,28 +1146,30 @@ <h2>4. Adjusting QUAST reports and plots</h2>

<a name="sec5"></a><p>
<h2>5. Citation</h2><br>
If you use QUAST in your research, please include <i>Gurevich et al., 2013</i> into your reference list:<br>
For citing QUAST v4.* or Icarus visualizations, please include <i>Mikheenko et al., 2016</i> into your reference list:<br>
<div style='margin-top: 5px; padding-left: 30px; padding-top: 5px; padding-bottom: 5px; background-color: #EEE'>
Alexey Gurevich, Vladislav Saveliev, Nikolay Vyahhi and Glenn Tesler, <br>
QUAST: quality assessment tool for genome assemblies, <br>
<i>Bioinformatics</i> (2013) 29 (8): 1072-1075. doi: <a href="http://dx.doi.org/10.1093/bioinformatics/btt086">10.1093/bioinformatics/btt086</a><br>
First published online: February 19, 2013
Alla Mikheenko, Gleb Valin, Andrey Prjibelski, Vladislav Saveliev, Alexey Gurevich, <br>
Icarus: visualizer for <i>de novo</i> assembly evaluation, <br>
<i>Bioinformatics</i> (2016) 32 (21): 3321-3323. doi: <a href="http://dx.doi.org/10.1093/bioinformatics/btw379">10.1093/bioinformatics/btw379</a><br>
First published online: July 4, 2016
</div>
<br>
If you use MetaQUAST in your research, please include <i>Mikheenko et al., 2016</i> into your reference list:<br>

For citing QUAST v3.* or MetaQUAST in your research, please include <i>Mikheenko et al., 2016</i> into your reference list:<br>
<div style='margin-top: 5px; padding-left: 30px; padding-top: 5px; padding-bottom: 5px; background-color: #EEE'>
Alla Mikheenko, Vladislav Saveliev, Alexey Gurevich, <br>
MetaQUAST: evaluation of metagenome assemblies, <br>
<i>Bioinformatics</i> (2016) 32 (7): 1088-1090. doi: <a href="http://dx.doi.org/10.1093/bioinformatics/btv697">10.1093/bioinformatics/btv697</a><br>
First published online: November 26, 2015
</div>
<br>
If you use Icarus visualizations in your research, please include <i>Mikheenko et al., 2016</i> into your reference list:<br>

For citing QUAST v1.* and v2.* or QUAST software in general, please include <i>Gurevich et al., 2013</i> into your reference list:<br>
<div style='margin-top: 5px; padding-left: 30px; padding-top: 5px; padding-bottom: 5px; background-color: #EEE'>
Alla Mikheenko, Gleb Valin, Andrey Prjibelski, Vladislav Saveliev, Alexey Gurevich, <br>
Icarus: visualizer for <i>de novo</i> assembly evaluation, <br>
<i>Bioinformatics</i> (2016) 32 (21): 3321-3323. doi: <a href="http://dx.doi.org/10.1093/bioinformatics/btw379">10.1093/bioinformatics/btw379</a><br>
First published online: July 4, 2016
Alexey Gurevich, Vladislav Saveliev, Nikolay Vyahhi and Glenn Tesler, <br>
QUAST: quality assessment tool for genome assemblies, <br>
<i>Bioinformatics</i> (2013) 29 (8): 1072-1075. doi: <a href="http://dx.doi.org/10.1093/bioinformatics/btt086">10.1093/bioinformatics/btt086</a><br>
First published online: February 19, 2013
</div>

<a name="sec6"></a><p>
Expand Down

0 comments on commit 6564c26

Please sign in to comment.