This repository is a WORK IN PROGRESS
Differential expression analysis with RNAseq data from 16 species of Fundulus killifish following a salinity exposure experiment (FW, BW, transfer).
De novo transcriptome assemblies and annotations for each species are located here:
Raw data: https://www.ncbi.nlm.nih.gov/bioproject/473009
Analysis scripts: https://github.com/johnsolk/RNAseq_15killifish
See this repository for assembly/evaluation scripts and data.