Plate 5 aggregating cells and correlating wells #22
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MikeLippincott
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Jan 26, 2024
...is/plate_5_characteristics/nbconverted/plate_5_sc_feature_selected_camerons_agg_well_corr.py
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0.data_analysis/plate_5_characteristics/utils/CorrelateAggWells.py
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Hey @MikeLippincott, I finished addressing your comments, please let me know if there is anything else you'd suggest I change. |
MikeLippincott
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Feb 2, 2024
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Thanks @MikeLippincott, merging now! |
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In this pr, I use cameron's method to aggregate cells to the well level and correlate wells of both different genotypes and the same genotype using cell profiler feature vectors. This is the first stage. In later stages this data will be used for further analysis. Please let me know have any questions or suggestions.