Remove hard-coded setting of --flm=quadratic, since that is already t…

…he default in 'eddy'
Washington-University · Aug 24, 2020 · 74618e8 · 74618e8
1 parent b70606f
commit 74618e8
Showing 1 changed file with 0 additions and 1 deletion.
diff --git a/DiffusionPreprocessing/scripts/run_eddy.sh b/DiffusionPreprocessing/scripts/run_eddy.sh
@@ -592,7 +592,6 @@ main() {
 	eddy_command+="--fwhm=${fwhm_value} "
 	eddy_command+="--topup=${topupdir}/topup_Pos_Neg_b0 "
 	eddy_command+="--out=${workingdir}/eddy_unwarped_images "
-	eddy_command+="--flm=quadratic "
 
 	if [ ! -z "${dont_peas}" ]; then
 		eddy_command+="--dont_peas "