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Use values_as_in_model to extract the parameters from a Transition #2202

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merged 10 commits into from
May 7, 2024

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torfjelde
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This PR depends on features introduced after the breaking release of DPPL and so tests will not pass until #2202 has gone through

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For reference: used the new DebugContext to identify the bug in the tests and it was very convenient:)

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Pull Request Test Coverage Report for Build 8968103177

Warning: This coverage report may be inaccurate.

This pull request's base commit is no longer the HEAD commit of its target branch. This means it includes changes from outside the original pull request, including, potentially, unrelated coverage changes.

Details

  • 0 of 1 (0.0%) changed or added relevant line in 1 file are covered.
  • No unchanged relevant lines lost coverage.
  • Overall coverage remained the same at 0.0%

Changes Missing Coverage Covered Lines Changed/Added Lines %
src/mcmc/Inference.jl 0 1 0.0%
Totals Coverage Status
Change from base Build 8867001278: 0.0%
Covered Lines: 0
Relevant Lines: 1527

💛 - Coveralls

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torfjelde commented May 6, 2024

@yebai @devmotion tests are passing and everything seems good.

You happy with it? I'd also like to point to #2215

@torfjelde torfjelde merged commit 56f64ec into master May 7, 2024
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@torfjelde torfjelde deleted the torfjelde/getparams-fix branch May 7, 2024 17:40
sethaxen added a commit to mhauru/Pathfinder.jl that referenced this pull request Jul 4, 2024
Ensures `getparams` uses the changes introduced in TuringLang/Turing.jl#2202
sethaxen added a commit to mlcolab/Pathfinder.jl that referenced this pull request Aug 16, 2024
* Add support for Turing v0.33

* Bump Turing compat for docs and tests

* Fix Turing compat format

* Add and test utility to create a LogDensityProblem

* Add utility for converting draws to chains

* Use draws_to_chains utility

* Remove now-unused `flattened_varnames_list` utility

* Simplify Turing integration using LogDensityProblems

* Bump compat lower bounds for mutual compatibility

* Bump Turing lower bounds

Ensures `getparams` uses the changes introduced in TuringLang/Turing.jl#2202

* Reorganize Turing tests

* Bump DynamicPPL lower bound

* Also add Chains to individual paths in multipathfinder result

* Test additional models

* Remove unused method

* Bump AdvancedHMC integration test compat  to AHMC v0.6

* Increment patch number

---------

Co-authored-by: Seth Axen <[email protected]>
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3 participants