Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Improve UX when querying annotation VCFs #521

Merged
merged 2 commits into from
Feb 23, 2024

Conversation

gspowley
Copy link
Member

When querying a sample-less annotation VCF file with tiledb.cloud.vcf.read, the samples parameter must be provided.

Prior to this PR, the samples had to be provided as a list:

samples=[""],

This PR allows the samples to also be provided as a string:

samples="",

Input validation is also improved with more useful feedback to the user.

Copy link

This pull request has been linked to Shortcut Story #41561: Improve UX when querying annotation VCFs.

Copy link
Member

@leipzig leipzig left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

yep

Copy link

@ckrilow ckrilow left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Looks great, I really like this functionality.

@gspowley gspowley merged commit 2606311 into main Feb 23, 2024
12 checks passed
@gspowley gspowley deleted the gspowley/sc-41561/sampleless-vcf-query branch February 23, 2024 18:40
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

3 participants