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selecting disparity metrics vignette
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@article{dispRity, | ||
author = {Guillerme, Thomas}, | ||
title = {{dispRity: A modular R package for measuring disparity}}, | ||
journal = {Methods in Ecology and Evolution}, | ||
volume = {9}, | ||
number = {7}, | ||
pages = {1755-1763}, | ||
keywords = {disparity, disparity-through-time, ecology, multidimensionality, ordination, palaeobiology}, | ||
doi = {10.1111/2041-210X.13022}, | ||
url = {https://besjournals.onlinelibrary.wiley.com/doi/abs/10.1111/2041-210X.13022}, | ||
year = {2018} | ||
} | ||
@article{beck2014, | ||
author = {Robin M. D. Beck and Michael S. Y. Lee }, | ||
title = {Ancient dates or accelerated rates? Morphological clocks and the antiquity of placental mammals}, | ||
journal = {Proceedings of the Royal Society B: Biological Sciences}, | ||
volume = {281}, | ||
number = {1793}, | ||
pages = {20141278}, | ||
year = {2014}, | ||
doi = {10.1098/rspb.2014.1278}, | ||
URL = {https://royalsocietypublishing.org/doi/abs/10.1098/rspb.2014.1278}, | ||
eprint = {https://royalsocietypublishing.org/doi/pdf/10.1098/rspb.2014.1278} | ||
} | ||
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||
@article{marcy2016, | ||
title={Getting a head in hard soils: convergent skull evolution and divergent allometric patterns explain shape variation in a highly diverse genus of pocket gophers (Thomomys)}, | ||
author={Marcy, Ariel E and Hadly, Elizabeth A and Sherratt, Emma and Garland, Kathleen and Weisbecker, Vera}, | ||
journal={BMC evolutionary biology}, | ||
volume={16}, | ||
number={1}, | ||
pages={207}, | ||
year={2016}, | ||
publisher={BioMed Central} | ||
} | ||
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||
@article{wright2017, | ||
Author = {Wright, David F. }, | ||
Da = {2017/10/23}, | ||
Doi = {10.1038/s41598-017-13979-9}, | ||
Id = {Wright2017}, | ||
Isbn = {2045-2322}, | ||
Journal = {Scientific Reports}, | ||
Number = {1}, | ||
Pages = {13745}, | ||
Title = {Phenotypic Innovation and Adaptive Constraints in the Evolutionary Radiation of Palaeozoic Crinoids}, | ||
Ty = {JOUR}, | ||
Url = {https://doi.org/10.1038/s41598-017-13979-9}, | ||
Volume = {7}, | ||
Year = {2017} | ||
} | ||
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||
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||
@article{jones2015, | ||
author = {Jones, Natalie T. and Germain, Rachel M. and Grainger, Tess N. and Hall, Aaron M. and Baldwin, Lyn and Gilbert, Benjamin}, | ||
title = {Dispersal mode mediates the effect of patch size and patch connectivity on metacommunity diversity}, | ||
journal = {Journal of Ecology}, | ||
volume = {103}, | ||
number = {4}, | ||
pages = {935-944}, | ||
keywords = {animal-dispersed seeds, aspen stands, connectivity, diffuse boundaries, dispersal syndrome, metapopulation, plant diversity, species richness}, | ||
doi = {10.1111/1365-2745.12405}, | ||
url = {https://besjournals.onlinelibrary.wiley.com/doi/abs/10.1111/1365-2745.12405}, | ||
eprint = {https://besjournals.onlinelibrary.wiley.com/doi/pdf/10.1111/1365-2745.12405}, | ||
year = {2015} | ||
} | ||
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||
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||
@article{hopkins2016, | ||
title={Non-linear ontogenetic shape change in Cryptolithus tesselatus (Trilobita) using three-dimensional geometric morphometrics}, | ||
author={Melanie Hopkins and Kirk Pearson}, | ||
journal={Palaeontologia Electronica}, | ||
volume={19}, | ||
number={3}, | ||
pages={1--54}, | ||
year={2016}, | ||
publisher={Paleontological Society} | ||
} | ||
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||
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||
@article{healy2019, | ||
title={Animal life history is shaped by the pace of life and the distribution of age-specific mortality and reproduction}, | ||
author={Healy, Kevin and Ezard, Thomas H. G. and Jones, Owen R. and Salguero-G'{o}mez, Roberto and Buckley, Yvonne M.}, | ||
journal={Nature Ecology \& Evolution}, | ||
volume={2397-334X}, | ||
year={2019}, | ||
doi={https://doi.org/10.1038/s41559-019-0938-7} | ||
} | ||
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||
@article{bat2015, | ||
author = {Cardoso, Pedro and Rigal, François and Carvalho, José C.}, | ||
title = {BAT – Biodiversity Assessment Tools, an R package for the measurement and estimation of alpha and beta taxon, phylogenetic and functional diversity}, | ||
journal = {Methods in Ecology and Evolution}, | ||
volume = {6}, | ||
number = {2}, | ||
pages = {232-236}, | ||
keywords = {accumulation curves, biodiversity estimation, diversity partition, extrapolation, nonparametric estimators, sampling bias}, | ||
doi = {10.1111/2041-210X.12310}, | ||
url = {https://besjournals.onlinelibrary.wiley.com/doi/abs/10.1111/2041-210X.12310}, | ||
eprint = {https://besjournals.onlinelibrary.wiley.com/doi/pdf/10.1111/2041-210X.12310}, | ||
year = {2015} | ||
} | ||
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@article{guillerme2024, | ||
title={The what, how and why of trait-based analyses in ecology}, | ||
author={Guillerme, Thomas and Cardoso, Pedro and J{\o}rgensen, Maria Wagner and Mammola, Stefano and Matthews, Thomas J}, | ||
journal={bioRxiv}, | ||
pages={2024--06}, | ||
year={2024}, | ||
publisher={Cold Spring Harbor Laboratory} | ||
} | ||
|
||
@article{mammola2021concepts, | ||
title={Concepts and applications in functional diversity}, | ||
author={Mammola, Stefano and Carmona, Carlos P and Guillerme, Thomas and Cardoso, Pedro}, | ||
journal={Functional Ecology}, | ||
volume={35}, | ||
number={9}, | ||
pages={1869--1885}, | ||
year={2021}, | ||
publisher={Wiley Online Library} | ||
} | ||
|
||
@article{guillerme2020, | ||
title={Shifting spaces: Which disparity or dissimilarity measurement best summarize occupancy in multidimensional spaces?}, | ||
author={Guillerme, Thomas and Puttick, Mark N and Marcy, Ariel E and Weisbecker, Vera}, | ||
journal={Ecology and evolution}, | ||
volume={10}, | ||
number={14}, | ||
pages={7261--7275}, | ||
year={2020}, | ||
publisher={Wiley Online Library} | ||
} |
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