fix-GPR_curation_for_Carnitine_shuttle #2024
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: YAML validation | |
| on: [push] | |
| jobs: | |
| yaml-validation: | |
| runs-on: ubuntu-latest | |
| container: | |
| image: ghcr.io/metabolicatlas/memote-docker:0.13 | |
| volumes: | |
| - ${{ github.workspace }}:/project:rw | |
| options: --user root --workdir /project | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: YAML Lint | |
| uses: metabolicatlas/action-yamllint@v3 | |
| with: | |
| ## File(s) or Directory, separate by space if multiple files or folder are specified | |
| file_or_dir: model/ | |
| ## Custom configuration (as YAML source) | |
| config_data: "{extends: default, rules: {line-length: disable}}" | |
| ## Return non-zero exit code on warnings as well as errors | |
| # strict: # optional, default is false | |
| - name: Basic MEMOTE tests | |
| run: python code/test/memoteTest.py | |
| - name: Test import with cobrapy and consistency with annotation files | |
| run: python code/test/sanityCheck.py |