fix: linting

SwissDataScienceCenter · Nov 22, 2024 · 4b7ab43 · 4b7ab43
1 parent 924b08f
commit 4b7ab43
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Showing 4 changed files with 12 additions and 8 deletions.
diff --git a/docker/vscode/R.Dockerfile b/docker/vscode/R.Dockerfile
@@ -4,15 +4,16 @@ ARG R_VERSION=4.4.2
 ARG SESSION_USER=vscode
 ARG WORKDIR=/home/${SESSION_USER}/work
 
+SHELL [ "/bin/bash", "-c", "-o", "pipefail" ]
 USER root
 # From https://docs.posit.co/resources/install-r.html
 RUN curl -O https://cdn.rstudio.com/r/debian-12/pkgs/r-${R_VERSION}_1_amd64.deb \
 	&& apt-get update \
-	&& apt-get install -y ./r-${R_VERSION}_1_amd64.deb \
+	&& apt-get install -y --no-install-recommends ./r-${R_VERSION}_1_amd64.deb \
 	&& rm -rf /var/lib/apt/lists/* \
 	&& rm -rf ./r-${R_VERSION}_1_amd64.deb \
-	&& sudo ln -s /opt/R/${R_VERSION}/bin/R /usr/local/bin/R \
-	&& sudo ln -s /opt/R/${R_VERSION}/bin/Rscript /usr/local/bin/Rscript
+	&& ln -s /opt/R/${R_VERSION}/bin/R /usr/local/bin/R \
+	&& ln -s /opt/R/${R_VERSION}/bin/Rscript /usr/local/bin/Rscript
 
 USER ${SESSION_USER}
 WORKDIR ${WORKDIR}
@@ -21,5 +22,5 @@ WORKDIR ${WORKDIR}
 # The .Rprofile changes allow R to be able to use precompiled packages
 # See https://packagemanager.posit.co/client/#/repos/cran/setup
 RUN mkdir -p ${WORKDIR}/.rlibs \
-	&& echo "\nR_LIBS_SITE=\"${WORKDIR}/.rlibs\"\n" >> /home/${SESSION_USER}/.Renviron \
-	&& echo "\noptions(repos = c(CRAN = \"https://packagemanager.posit.co/cran/__linux__/bookworm/latest\"))\n" >>  /home/${SESSION_USER}/.Rprofile
+	&& printf "\nR_LIBS_SITE=\"%s/.rlibs\"\n" "${WORKDIR}" >> /home/${SESSION_USER}/.Renviron \
+	&& printf "\noptions(repos = c(CRAN = \"https://packagemanager.posit.co/cran/__linux__/bookworm/latest\"))\n" >>  /home/${SESSION_USER}/.Rprofile
diff --git a/docker/vscode/base.Dockerfile b/docker/vscode/base.Dockerfile
@@ -2,8 +2,9 @@ ARG BASE_IMAGE=mcr.microsoft.com/devcontainers/base:bookworm
 FROM $BASE_IMAGE
 ARG VSCODIUM_VERSION=1.95.2.24313
 ARG SESSION_USER=vscode
+SHELL [ "/bin/bash", "-c", "-o", "pipefail" ]
 RUN apt-get update && \
-	apt-get install -y curl tini git-lfs && \
+	apt-get install -y --no-install-recommends curl tini git-lfs && \
 	mkdir -p /codium-server && \
 	curl -L https://github.com/VSCodium/vscodium/releases/download/${VSCODIUM_VERSION}/vscodium-reh-web-linux-x64-${VSCODIUM_VERSION}.tar.gz | tar -xz -C /codium-server && \
 	rm -rf /var/lib/apt/lists/*

diff --git a/docker/vscode/conda.Dockerfile b/docker/vscode/conda.Dockerfile
@@ -7,9 +7,10 @@ ARG SESSION_USER=vscode
 ARG WORKDIR=/home/${SESSION_USER}/work
 ARG VENVS_PATH=${WORKDIR}/.venvs
 ENV VENVS_PATH=${VENVS_PATH}
+SHELL [ "/bin/bash", "-c", "-o", "pipefail" ]
 USER root
 RUN apt-get update && \
-	apt-get install -y curl && \
+	apt-get install -y curl --no-install-recommends && \
 	curl -L "https://github.com/conda-forge/miniforge/releases/download/${MINIFORGE_VERSION}/Miniforge3-${OS}-${ARCH}.sh" -o install.sh && \
 	rm -rf /var/lib/apt/lists/*
 

diff --git a/docker/vscode/poetry.Dockerfile b/docker/vscode/poetry.Dockerfile
@@ -7,9 +7,10 @@ ARG POETRY_VERSION=""
 ARG SESSION_USER=vscode
 ARG WORKDIR=/home/${SESSION_USER}/work
 ARG VENVS_PATH=${WORKDIR}/.venvs
+SHELL [ "/bin/bash", "-c", "-o", "pipefail" ]
 USER root
 RUN apt-get update && \
-	apt-get install -y curl libz-dev libreadline-dev libncurses-dev libsqlite3-dev libssl-dev liblzma-dev libgdbm-dev libbz2-dev libffi-dev && \
+	apt-get install -y --no-install-recommends curl libz-dev libreadline-dev libncurses-dev libsqlite3-dev libssl-dev liblzma-dev libgdbm-dev libbz2-dev libffi-dev && \
 	mkdir -p /python-build && \
 	curl -L https://github.com/pyenv/pyenv/archive/refs/tags/${PYENV_VERSION}.tar.gz | tar -xz -C /python-build && \
 	/bin/sh /python-build/*/plugins/python-build/install.sh && \