Rel 4.5.1

.github/workflows/CI.yml

@@ -7,7 +7,7 @@ on:
   pull_request:
 
 env:
-  CMDSTAN: "/home/worker/cmdstan-2.33.0/"
+  CMDSTAN: "/home/worker/cmdstan-2.34.1/"
 
 jobs:
   test:
@@ -41,17 +41,17 @@ jobs:
           OLDWD=`pwd`
           cd ~
           pwd
-          wget https://github.com/stan-dev/cmdstan/releases/download/v2.33.0/cmdstan-2.33.0.tar.gz
-          tar -xzpf cmdstan-2.33.0.tar.gz
+          wget https://github.com/stan-dev/cmdstan/releases/download/v2.34.1/cmdstan-2.34.1.tar.gz
+          tar -xzpf cmdstan-2.34.1.tar.gz
           ls -lia .
-          ls -lia ./cmdstan-2.33.0
-          ls -lia ./cmdstan-2.33.0/make
-          touch ./cmdstan-2.33.0/make/local
-          echo "STAN_THREADS=true" > ./cmdstan-2.33.0/make/local
+          ls -lia ./cmdstan-2.34.1
+          ls -lia ./cmdstan-2.34.1/make
+          touch ./cmdstan-2.34.1/make/local
+          echo "STAN_THREADS=true" > ./cmdstan-2.34.1/make/local
           make -C $CMDSTAN build
           cd $OLDWD
         env:
-          CMDSTAN: "/home/runner/cmdstan-2.33.0/"
+          CMDSTAN: "/home/runner/cmdstan-2.34.1/"
       - uses: actions/checkout@v2
       - uses: julia-actions/setup-julia@v1
         with:
@@ -70,7 +70,7 @@ jobs:
       - uses: julia-actions/julia-buildpkg@latest
       - uses: julia-actions/julia-runtest@latest
         env:
-          CMDSTAN: "/home/runner/cmdstan-2.33.0/"
+          CMDSTAN: "/home/runner/cmdstan-2.34.1/"
       - uses: julia-actions/julia-processcoverage@v1
         if: matrix.version == '1' && matrix.os == 'ubuntu-latest' && matrix.num_threads == 1
       - uses: codecov/codecov-action@v1

Project.toml

@@ -1,7 +1,7 @@
 name = "StanDiagnose"
 uuid = "fb13fc95-9a72-5e81-90ef-432a29d7f4c2"
 authors = ["Rob J Goedman <[email protected]>"]
-version = "4.5.0"
+version = "4.5.1"
 
 [deps]
 CSV = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b"

README.md

@@ -31,7 +31,7 @@ pkg> add StanDiagnose.jl
 You need a working [Stan's cmdstan](https://mc-stan.org/users/interfaces/cmdstan.html) installation, the path of which you should specify either in `CMDSTAN` or `JULIA_CMDSTAN_HOME`, eg in your `~/.julia/config/startup.jl` have a line like
 ```julia
 # CmdStan setup
-ENV["JULIA_CMDSTAN_HOME"] = expanduser("~/src/cmdstan-2.19.1/") # replace with your path
+ENV["JULIA_CMDSTAN_HOME"] = expanduser("~/src/cmdstan-2.34.1/") # replace with your path
 ```
 
 This package is derived from Tamas Papp's [StanRun.jl]() package.

src/stanmodel/DiagnoseModel.jl

@@ -50,7 +50,7 @@ Create a DiagnoseModel and compile the Stan Language Model..
 function DiagnoseModel(
   name::AbstractString,
   model::AbstractString,
-  tmpdir = CMDSTAN_HOME)
+  tmpdir = mktempdir())
 
   !isdir(tmpdir) && mkdir(tmpdir)