Rel 10.4.5 = Updated testing on Github

StanJulia · Oct 3, 2023 · d8e4276 · d8e4276
1 parent 4ee6224
commit d8e4276
Show file tree

Hide file tree

Showing 3 changed files with 10 additions and 18 deletions.
diff --git a/.github/workflows/CI.yml b/.github/workflows/CI.yml
@@ -7,7 +7,7 @@ on:
   pull_request:
 
 env:
-  CMDSTAN: "/home/worker/cmdstan-2.33.0/"
+  CMDSTAN: "/home/worker/cmdstan-2.33.1/"
 
 jobs:
   test:
@@ -41,17 +41,17 @@ jobs:
           OLDWD=`pwd`
           cd ~
           pwd
-          wget https://github.com/stan-dev/cmdstan/releases/download/v2.33.0/cmdstan-2.33.0.tar.gz
-          tar -xzpf cmdstan-2.33.0.tar.gz
+          wget https://github.com/stan-dev/cmdstan/releases/download/v2.33.1/cmdstan-2.33.1.tar.gz
+          tar -xzpf cmdstan-2.33.1.tar.gz
           ls -lia .
-          ls -lia ./cmdstan-2.33.0
-          ls -lia ./cmdstan-2.33.0/make
-          touch ./cmdstan-2.33.0/make/local
-          echo "STAN_THREADS=true" > ./cmdstan-2.33.0/make/local
+          ls -lia ./cmdstan-2.33.1
+          ls -lia ./cmdstan-2.33.1/make
+          touch ./cmdstan-2.33.1/make/local
+          echo "STAN_THREADS=true" > ./cmdstan-2.33.1/make/local
           make -C $CMDSTAN build
           cd $OLDWD
         env:
-          CMDSTAN: "/home/runner/cmdstan-2.33.0/"
+          CMDSTAN: "/home/runner/cmdstan-2.33.1/"
       - uses: actions/checkout@v2
       - uses: julia-actions/setup-julia@v1
         with:
@@ -70,7 +70,7 @@ jobs:
       - uses: julia-actions/julia-buildpkg@latest
       - uses: julia-actions/julia-runtest@latest
         env:
-          CMDSTAN: "/home/runner/cmdstan-2.33.0/"
+          CMDSTAN: "/home/runner/cmdstan-2.33.1/"
       - uses: julia-actions/julia-processcoverage@v1
         if: matrix.version == '1' && matrix.os == 'ubuntu-latest' && matrix.num_threads == 1
       - uses: codecov/codecov-action@v1

diff --git a/docs/src/INSTALLATION.md b/docs/src/INSTALLATION.md
@@ -24,7 +24,7 @@ to `./julia/config/startup.jl`. Remember to use `expanduser()` if you use `~` in
 
 I typically prefer cmdstan not to include the cmdstan version number in the above path to cmdstan (no update needed when the cmdstan version is updated).
 
-Currently tested with cmdstan 2.32.0.
+Currently tested with cmdstan 2.33.1.
 
 Note: StanSample.jl v6, supports multithreading in the `cmdstan` binary and requires cmdstan v2.28.2 and up. To activate multithreading in `cmdstan` this needs to be specified during the build process of `cmdstan`. 
 

diff --git a/docs/src/index.md b/docs/src/index.md
@@ -36,11 +36,3 @@ Data and input test cases:
 5. NamedArray
 6. ScalarObs
 7. ZeroLengthArray
-
-To be completed:
-
-## Examples of solving differential equations (DiffEqBayesStan)
-
-1. LotkaVolterra benchmark
-2. Lynx_hare example
-3. SIR model