Code

tbprofiler v6.4.1#1108

Code

Merged

kapsakcj merged 27 commits intoStaPH-B:masterStaPH-B/docker-builds:masterfrom sage-wright:tbprofilersage-wright/docker-builds:tbprofilerCopy head branch name to clipboardNov 21, 2024

+127-1

Commits

Commits on Jul 10, 2024

• add genoflu

  sage-wright

  committed
  50ccd8b

• add readme

  sage-wright

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  c7436d8

• add to license

  sage-wright

  committed
  974d6e1

Commits on Jul 11, 2024

• add --force-pkgs-dirs

  sage-wright

  committed
  bef89c2

Commits on Sep 23, 2024

• Merge branch 'StaPH-B:master' into main

  sage-wright

  authored
  fd3397e

Commits on Oct 10, 2024

• Merge branch 'StaPH-B:master' into main

  sage-wright

  authored
  79ad63e

• krakentools add

  sage-wright

  committed
  7fc8de3

• update readmes

  sage-wright

  committed
  4327e5d

Commits on Oct 22, 2024

• silence warnings about AS casing; fix typo

  kapsakcj

  committed
  25cd73a

• added comment in dockerfile & added additional dependencies and versions to readme for krakentools

  kapsakcj

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  da6080d

Commits on Oct 23, 2024

• pinning biopython and pandas versions and removing unnecessary jq and gawk

  kapsakcj

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  f4b3565

• fixed version of python installed listed in krakentools readme

  kapsakcj

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  3eb82ab

Commits on Oct 31, 2024

• Merge branch 'StaPH-B:master' into main

  sage-wright

  authored
  f2db335

• add tbprofiler 6.4.0

  sage-wright

  committed
  570fccb

• Merge branch 'main' of https://github.com/sage-wright/docker-builds into main

  sage-wright

  committed
  39777c4

• update readme

  sage-wright

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  f650fcb

• add list_db

  sage-wright

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  b6837a0

• exec format, capitalize AS

  sage-wright

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  245b7b6

• update versions

  sage-wright

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  c1cd8c6

Commits on Nov 1, 2024

• pinning delly version due to conflict resolution with usher 0.6.3 which is required by tb-profiler

  kapsakcj

  committed
  8ed51f3

• added delly to list of deps for tb-profiler. Plus link to GH issue describing troubles w delly

  kapsakcj

  committed
  1e90eaf

Commits on Nov 20, 2024

• Merge branch 'StaPH-B:master' into main

  sage-wright

  authored
  107e463

• add 6.4.1

  sage-wright

  committed
  e195bf7

• update readme

  sage-wright

  committed
  a35ae1b

• correct versions of a few dependencies in tbprofiler readme

  kapsakcj

  committed
  be5eb60

Commits on Nov 21, 2024

• Update Dockerfile

  sage-wright

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  094ea4f

• Update README.md

  sage-wright

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  4b5fef9