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adding multiqc version 1.25 #1062

Merged
merged 1 commit into from
Sep 30, 2024
Merged

adding multiqc version 1.25 #1062

merged 1 commit into from
Sep 30, 2024

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erinyoung
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There's a new version of multiqc!

According to the release notes, there a new feature where the summary table can group samples together. It looks really nice.

For the most part, I just copied a prior Dockerfile and update the version arg. I also added the -vv flag.

$ diff multiqc/1.22.3/Dockerfile multiqc/1.25/Dockerfile 
3c3
< ARG MULTIQC_VER="1.22.3"
---
> ARG MULTIQC_VER="1.25"
21c21
< RUN pip3 install --no-cache-dir "multiqc==${MULTIQC_VER}"
---
> RUN pip3 install --no-cache-dir -vv "multiqc==${MULTIQC_VER}"
47,48c47
<     ls multiqc_report.html 
<     
---
>     ls multiqc_report.html     

Pull Request (PR) checklist:

  • Include a description of what is in this pull request in this message.
  • The dockerfile successfully builds to a test target for the user creating the PR. (i.e. docker build --tag samtools:1.15test --target test docker-builds/samtools/1.15 )
  • Directory structure as name of the tool in lower case with special characters removed with a subdirectory of the version number (i.e. spades/3.12.0/Dockerfile)
    • (optional) All test files are located in same directory as the Dockerfile (i.e. shigatyper/2.0.1/test.sh)
  • Create a simple container-specific README.md in the same directory as the Dockerfile (i.e. spades/3.12.0/README.md)
    • If this README is longer than 30 lines, there is an explanation as to why more detail was needed
  • Dockerfile includes the recommended LABELS
  • Main README.md has been updated to include the tool and/or version of the dockerfile(s) in this PR
  • Program_Licenses.md contains the tool(s) used in this PR and has been updated for any missing

@Kincekara Kincekara merged commit 7eaf783 into master Sep 30, 2024
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@Kincekara
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Thank you for the update!
Deploy link: https://github.com/StaPH-B/docker-builds/actions/runs/11111411802

@erinyoung erinyoung deleted the erin-multiqc branch October 7, 2024 21:30
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2 participants