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Consistent segfault when precompiling on Julia 1.8, Mac M1 #65

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asinghvi17 opened this issue May 3, 2022 · 1 comment
Closed

Consistent segfault when precompiling on Julia 1.8, Mac M1 #65

asinghvi17 opened this issue May 3, 2022 · 1 comment

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@asinghvi17
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When precompiling DifferentialEquations, I get the following error, which seems to come from NonlinearSolve.jl. I'm not sure if it's a NonlinearSolve issue or a Julia issue, but I thought I'd post it here for reference.

Error message here 
[ Info: Precompiling DifferentialEquations [0c46a032-eb83-5123-abaf-570d42b7fbaa]

signal (11): Segmentation fault: 11
in expression starting at /Users/anshul/.julia/packages/NonlinearSolve/7hPLq/src/NonlinearSolve.jl:15
jl_decode_value at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
jl_decode_value at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
jl_decode_value_array at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
ijl_uncompress_ir at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
_Z16jl_emit_codeinstP19_jl_code_instance_tP15_jl_code_info_tR20_jl_codegen_params_t at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-codegen.1.8.dylib (unknown line)
_Z20jl_compile_workqueueRNSt3__13mapIP19_jl_code_instance_tNS_5tupleIJNS_10unique_ptrIN4llvm6ModuleENS_14default_deleteIS6_EEEE20_jl_llvm_functions_tEEENS_4lessIS2_EENS_9allocatorINS_4pairIKS2_SB_EEEEEER20_jl_codegen_params_t17CompilationPolicy at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-codegen.1.8.dylib (unknown line)
_ZL20_jl_compile_codeinstP19_jl_code_instance_tP15_jl_code_info_tm at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-codegen.1.8.dylib (unknown line)
jl_generate_fptr_impl at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-codegen.1.8.dylib (unknown line)
jl_compile_method_internal at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
ijl_apply_generic at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
jl_f__call_in_world_total at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
ijl_apply_generic at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
do_apply at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
concrete_eval_call at ./compiler/abstractinterpretation.jl:737
abstract_call_method_with_const_args at ./compiler/abstractinterpretation.jl:780
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:165
abstract_call_known at ./compiler/abstractinterpretation.jl:1666
abstract_call at ./compiler/abstractinterpretation.jl:1724
abstract_call at ./compiler/abstractinterpretation.jl:1703
abstract_eval_statement at ./compiler/abstractinterpretation.jl:1845
typeinf_local at ./compiler/abstractinterpretation.jl:2310
typeinf_nocycle at ./compiler/abstractinterpretation.jl:2406
_typeinf at ./compiler/typeinfer.jl:230
typeinf at ./compiler/typeinfer.jl:213
typeinf_edge at ./compiler/typeinfer.jl:876
abstract_call_method at ./compiler/abstractinterpretation.jl:632
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:156
abstract_call_known at ./compiler/abstractinterpretation.jl:1666
abstract_call at ./compiler/abstractinterpretation.jl:1724
abstract_call at ./compiler/abstractinterpretation.jl:1703
abstract_eval_statement at ./compiler/abstractinterpretation.jl:1845
typeinf_local at ./compiler/abstractinterpretation.jl:2310
typeinf_nocycle at ./compiler/abstractinterpretation.jl:2406
_typeinf at ./compiler/typeinfer.jl:230
typeinf at ./compiler/typeinfer.jl:213
typeinf_edge at ./compiler/typeinfer.jl:876
abstract_call_method at ./compiler/abstractinterpretation.jl:632
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:156
abstract_call_known at ./compiler/abstractinterpretation.jl:1666
abstract_call at ./compiler/abstractinterpretation.jl:1724
abstract_call at ./compiler/abstractinterpretation.jl:1703
abstract_eval_statement at ./compiler/abstractinterpretation.jl:1845
typeinf_local at ./compiler/abstractinterpretation.jl:2284
typeinf_nocycle at ./compiler/abstractinterpretation.jl:2406
_typeinf at ./compiler/typeinfer.jl:230
typeinf at ./compiler/typeinfer.jl:213
typeinf_edge at ./compiler/typeinfer.jl:876
abstract_call_method at ./compiler/abstractinterpretation.jl:632
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:156
abstract_call_known at ./compiler/abstractinterpretation.jl:1666
abstract_call at ./compiler/abstractinterpretation.jl:1724
abstract_call at ./compiler/abstractinterpretation.jl:1703
abstract_eval_statement at ./compiler/abstractinterpretation.jl:1845
typeinf_local at ./compiler/abstractinterpretation.jl:2284
typeinf_nocycle at ./compiler/abstractinterpretation.jl:2406
_typeinf at ./compiler/typeinfer.jl:230
typeinf at ./compiler/typeinfer.jl:213
typeinf_ext at ./compiler/typeinfer.jl:957
typeinf_ext_toplevel at ./compiler/typeinfer.jl:990
typeinf_ext_toplevel at ./compiler/typeinfer.jl:986
jfptr_typeinf_ext_toplevel_15079 at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/sys.dylib (unknown line)
ijl_apply_generic at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
jl_type_infer at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
jl_generate_fptr_impl at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-codegen.1.8.dylib (unknown line)
jl_compile_method_internal at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
ijl_apply_generic at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
@reexport at /Users/anshul/.julia/packages/Reexport/OxbHO/src/Reexport.jl:4
jl_invoke_julia_macro at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
jl_expand_macros at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
ijl_expand_stmt_with_loc at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
jl_toplevel_eval_flex at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
jl_toplevel_eval_flex at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
ijl_toplevel_eval_in at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
eval at ./boot.jl:368 [inlined]
include_string at ./loading.jl:1277
ijl_apply_generic at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
_include at ./loading.jl:1334
include at ./Base.jl:422 [inlined]
include_package_for_output at ./loading.jl:1400
jfptr_include_package_for_output_46348 at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/sys.dylib (unknown line)
ijl_apply_generic at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
do_call at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
eval_body at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
jl_interpret_toplevel_thunk at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
jl_toplevel_eval_flex at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
jl_toplevel_eval_flex at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
ijl_toplevel_eval_in at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
jlplt_ijl_toplevel_eval_in_13971 at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/sys.dylib (unknown line)
eval at ./boot.jl:368 [inlined]
include_string at ./loading.jl:1277
include_string at ./loading.jl:1287
ijl_apply_generic at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
exec_options at ./client.jl:301
_start at ./client.jl:522
jfptr__start_58807 at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/sys.dylib (unknown line)
ijl_apply_generic at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
true_main at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
jl_repl_entrypoint at /Applications/Julia-1.8.app/Contents/Resources/julia/lib/julia/libjulia-internal.1.8.dylib (unknown line)
Allocations: 5929456 (Pool: 5927121; Big: 2335); GC: 3
ERROR: LoadError: Failed to precompile NonlinearSolve [8913a72c-1f9b-4ce2-8d82-65094dcecaec] to /Users/anshul/.julia/compiled/v1.8/NonlinearSolve/jl_tbYC6N.
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:35
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, ignore_loaded_modules::Bool)
    @ Base ./loading.jl:1551
  [3] compilecache
    @ ./loading.jl:1495 [inlined]
  [4] _require(pkg::Base.PkgId)
    @ Base ./loading.jl:1199
  [5] _require_prelocked(uuidkey::Base.PkgId)
    @ Base ./loading.jl:1084
  [6] macro expansion
    @ ./loading.jl:1064 [inlined]
  [7] macro expansion
    @ ./lock.jl:223 [inlined]
  [8] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:1028
  [9] include
    @ ./Base.jl:422 [inlined]
 [10] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt64}}, source::String)
    @ Base ./loading.jl:1400
 [11] top-level scope
    @ stdin:1
in expression starting at /Users/anshul/.julia/packages/DiffEqBase/U3LtB/src/DiffEqBase.jl:1
julia> versioninfo()
Julia Version 1.8.0-beta3
Commit 3e092a2521 (2022-03-29 15:42 UTC)
Platform Info:
  OS: macOS (arm64-apple-darwin21.3.0)
  CPU: 10 × Apple M1 Max
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-13.0.1 (ORCJIT, apple-m1)
  Threads: 8 on 8 virtual cores
Environment:
  JULIA_NUM_THREADS = 8

(@v1.8) pkg> st -m NonlinearSolve
Status `~/.julia/environments/v1.8/Manifest.toml`
  [8913a72c] NonlinearSolve v0.3.16
@ChrisRackauckas
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Is this with the standard generic binary? Did you report to julialang/julia? There's not much I can do here if it's a base Julia issue, so closing so it can be reported there.

avik-pal pushed a commit that referenced this issue Nov 1, 2024
@ChrisRackauckas
Merge pull request #65 from avik-pal/ap/format
07dd6ce 
Format and add a format CI
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@ChrisRackauckas @asinghvi17