remove manifest

SciML · Mar 31, 2024 · 2a7b59b · 2a7b59b
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Showing 4 changed files with 12 additions and 13 deletions.
diff --git a/Manifest.toml b/Manifest.toml
@@ -203,8 +203,6 @@ uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"
 [[deps.DiffEqBase]]
 deps = ["ArrayInterface", "ConcreteStructs", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "FastClosures", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "Setfield", "SparseArrays", "Static", "StaticArraysCore", "Statistics", "Tricks", "TruncatedStacktraces"]
 git-tree-sha1 = "4fa023dbb15b3485426bbc6c43e030c14250d664"
-repo-rev = "ap/nlls"
-repo-url = "https://github.com/SciML/DiffEqBase.jl.git"
 uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
 version = "6.149.0"
 

diff --git a/Project.toml b/Project.toml
@@ -58,15 +58,15 @@ NonlinearSolveZygoteExt = "Zygote"
 [compat]
 ADTypes = "0.2.6"
 Aqua = "0.8"
-ArrayInterface = "7.7"
+ArrayInterface = "7.9"
 BandedMatrices = "1.4"
 BenchmarkTools = "1.4"
 ConcreteStructs = "0.2.3"
-CUDA = "5.1"
+CUDA = "5.2"
 DiffEqBase = "6.149.0"
 Enzyme = "0.11.15"
 FastBroadcast = "0.2.8"
-FastClosures = "0.3"
+FastClosures = "0.3.2"
 FastLevenbergMarquardt = "0.1"
 FiniteDiff = "2.21"
 FixedPointAcceleration = "0.3"
@@ -82,21 +82,21 @@ NLsolve = "4.5"
 NLSolvers = "0.5"
 NaNMath = "1"
 NonlinearProblemLibrary = "0.1.2"
-OrdinaryDiffEq = "6.63"
+OrdinaryDiffEq = "6.74"
 Pkg = "1.10"
 PrecompileTools = "1.2"
 Preferences = "1.4"
 Printf = "1.10"
 Random = "1.91"
 ReTestItems = "1"
-RecursiveArrayTools = "3.4"
+RecursiveArrayTools = "3.8"
 Reexport = "1.2"
 SIAMFANLEquations = "1.0.1"
 SafeTestsets = "0.1"
-SciMLBase = "2.19.0"
+SciMLBase = "2.28.0"
 SimpleNonlinearSolve = "1.2"
 SparseArrays = "1.10"
-SparseDiffTools = "2.14"
+SparseDiffTools = "2.17"
 SpeedMapping = "0.3"
 StableRNGs = "1"
 StaticArrays = "1.7"
@@ -105,7 +105,7 @@ Sundials = "4.23.1"
 Symbolics = "5.13"
 Test = "1.10"
 TimerOutputs = "0.5.23"
-Zygote = "0.6.67"
+Zygote = "0.6.69"
 julia = "1.10"
 
 [extras]

diff --git a/src/core/generalized_first_order.jl b/src/core/generalized_first_order.jl
@@ -191,7 +191,8 @@ function SciMLBase.__init(
             GB = :LineSearch
         end
 
-        trace = init_nonlinearsolve_trace(prob, alg, u, fu, ApplyArray(__zero, J), du; kwargs...)
+        trace = init_nonlinearsolve_trace(
+            prob, alg, u, fu, ApplyArray(__zero, J), du; kwargs...)
 
         return GeneralizedFirstOrderAlgorithmCache{iip, GB, maxtime !== nothing}(
             fu, u, u_cache, p, du, J, alg, prob, jac_cache, descent_cache, linesearch_cache,

diff --git a/src/internal/tracing.jl b/src/internal/tracing.jl
@@ -107,8 +107,8 @@ end
 function NonlinearSolveTraceEntry(prob::AbstractNonlinearProblem, iteration, fu, δu, J)
     nType = ifelse(prob isa NonlinearLeastSquaresProblem, :L2, :Inf)
     fnorm = prob isa NonlinearLeastSquaresProblem ? norm(fu, 2) : norm(fu, Inf)
-    return NonlinearSolveTraceEntry{nType}(iteration, fnorm, norm(δu, 2),
-        __cond(J), nothing, nothing, nothing, nothing)
+    return NonlinearSolveTraceEntry{nType}(
+        iteration, fnorm, norm(δu, 2), __cond(J), nothing, nothing, nothing, nothing)
 end
 
 function NonlinearSolveTraceEntry(prob::AbstractNonlinearProblem, iteration, fu, δu, J, u)