Update DCA Template Config File #39
Workflow file for this run
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| # ------------------------------------------------------------------------------ | |
| # When the main branch is updated, trigger a workflow in sage-bionetworks/data_curator_config | |
| # to generate templates from the data modell in this repo. | |
| # | |
| # You need to generate a secret in your github repo "PAT_GITHUB" containing | |
| # a personal access token with repo scope. The default secrets.GITHUB_TOKEN | |
| # will not work. | |
| # ------------------------------------------------------------------------------ | |
| name: dcc_config_repo_dispatch | |
| # Can specify other branches or triggers for this workflow | |
| # https://docs.github.com/en/actions/using-workflows/events-that-trigger-workflows | |
| on: | |
| pull_request: | |
| types: | |
| - closed # requires if_merged job below to run only during a merged PR | |
| workflow_dispatch: | |
| # Edit these variables for your data model | |
| env: | |
| DATA_MODEL: https://raw.githubusercontent.com/Sage-Bionetworks/data-models/main/example.model.jsonld | |
| # Can be NULL to generate templates for all schemas. Or a space-delimited string of schemas | |
| DATA_TYPES: "Biospecimen BulkRNA-seqAssay Patient" | |
| COMMUNITY_DIR: demo | |
| concurrency: | |
| # cancel the current running workflow from the same branch, PR when a new workflow is triggered | |
| # when the trigger is not a PR but a push, it will use the commit sha to generate the concurrency group | |
| # {{ github.workflow }}: the workflow name is used to generate the concurrency group. This allows you to have more than one workflows | |
| # {{ github.ref_type }}: the type of Git ref object created in the repository. Can be either branch or tag | |
| # {{ github.sha }}: full commit sha | |
| # credit: https://github.com/Sage-Bionetworks-Workflows/sagetasks/blob/main/.github/workflows/ci.yml | |
| group: >- | |
| ${{ github.workflow }}-${{ github.ref_type }}- | |
| ${{ github.sha }} | |
| cancel-in-progress: true | |
| jobs: | |
| repo_dispatch: | |
| # Extra logic to check PR is merged, see https://docs.github.com/en/actions/using-workflows/events-that-trigger-workflows#running-your-pull_request-workflow-when-a-pull-request-merges | |
| if: github.event.pull_request.merged == true || github.event != 'pull_request' | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Repo dispatch to data_curator_config event generate-templates | |
| run: | | |
| curl -X POST \ | |
| -H "Authorization: token ${{ secrets.PAT_GITHUB }}" \ | |
| -H "Accept: application/vnd.github+json" \ | |
| https://api.github.com/repos/Sage-Bionetworks/data_curator_config/dispatches \ | |
| -d '{"event_type": "generate_templates", "client_payload": { "data_model": "${{ env.DATA_MODEL }}", "data_types": "${{ env.DATA_TYPES }}", "community_dir": "${{ env.COMMUNITY_DIR }}"}}' |