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A loose collection of random scripts I've generated over the years

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RPINerd/biox_macguffins

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download
download
 
 
fasta
fasta
 
 
fastq
fastq
 
 
test
test
 
 
.gitignore
.gitignore
 
 
Half-baked Ideas.md
Half-baked Ideas.md
 
 
LICENSE
LICENSE
 
 
README.md
README.md
 
 
ann_to_bed.py
ann_to_bed.py
 
 
assembly.py
assembly.py
 
 
blast_tools.py
blast_tools.py
 
 
bp_revcomp
bp_revcomp
 
 
cigar_filter.py
cigar_filter.py
 
 
classes.py
classes.py
 
 
clstr_splitter.py
clstr_splitter.py
 
 
configs.py
configs.py
 
 
dircutadapt.py
dircutadapt.py
 
 
map_accessiontaxid.py
map_accessiontaxid.py
 
 
read_pair_merger.py
read_pair_merger.py
 
 
ref_filler.py
ref_filler.py
 
 
rpm_prep
rpm_prep
 
 
simples.py
simples.py
 
 
snp_primer_validate.py
snp_primer_validate.py
 
 
subsample.py
subsample.py
 
 
tabtodb.py
tabtodb.py
 
 
taxid_annotate.py
taxid_annotate.py
 
 

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BioX MacGuffins

A loose collection of random scripts I've generated over the years

Larger Tools

Read Pair Merger
Blast Tools

Scripts

Annotation to Bedfile Bisulfite Validation Basepair RevComp Cigar Filtering CDHit Cluster Splitter Crispr Validation CutAdapt Directory Wrapper Fasta/q Diff Fasta/q Uniq Base Content Filter Grep Wrapper for Fastq (RETIRED) SeqTK Subsample Wrapper

Utility

Classes Configs

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A loose collection of random scripts I've generated over the years

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GPL-3.0 license
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