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DST2_Project_Group_4

Analysis_report.pdf: the documentation of the whole analysis

Hep3B2.1-7_final_pass.vcf: the vcf file of the final passed variants.

Hep3B2.1-7_hg38_multianno_All.txt: variant annotation file using all Table S6 databases.

Hep3B2.1-7_.hg38_multianno_Part.txt: variant annotation file which only contains some important columns (cannot be uploaded to the system, only for easy-reading)

hisat.txt: all command lines for alignment, alignment cleaning, split N cigar reads, haplotype caller, select variants

merge.txt: all command lines for combine variants and variant filteration and greping the PASS variants

anno.sh: command lines for variant annotation

Result_Precision Medicine Matching System.html: matching result of Hep3B2.1-7 variants

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