March 15, 2022 (Dev Meeting)

Agenda:

• Pathology WG on GitHub (some housekeeping)
• MONAI Label
• MONAI requirements for cuCIM
• MONAI Dataset
  • The Cancer Imaging Archive (TCIA)
  • PathDB
• Feedback on https://github.com/Project-MONAI/MONAI/issues/3868
• Time of the next meetings (considering the daylight saving time changes)

Notes

• Downsampling images using cuCIM
  • cuCIM supports resize via cuda-implementation of skimage functions
  • Can be used in MONAI via CuCIM wrappers?

Action items:

• Everyone -> Please add your GitHub handle here.
• Sachi sync with David on MONAI Label to improve the plugin
• Gigon -> Add skimage resize to cucim.core.operations.expose.transform to be used in MONAI
• Jonny -> Prepare the result of the survey for the next meeting
• Everyone -> Review TCIA pathology dataset and give feedback on the most relevant and useful dataset