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Fix/ocm/misc #2267

Merged
merged 260 commits into from
Jan 1, 2022
Merged

Fix/ocm/misc #2267

merged 260 commits into from
Jan 1, 2022

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jdcpni
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@jdcpni jdcpni commented Jan 1, 2022

• composition.py:

  • _get_total_cost_of_control_allocation(): modify to handle nested agent_rep

• show_graph.py:

  • show_graph(): add show_all option

• optimizationcontrolmechanism.py:

  • update figure
  • implement state property
  • _update_state_input_ports_for_controller():
    fix bug in which assignment of OutputPort as state_feature caused crash

jdcpni and others added 30 commits November 7, 2021 18:25
@jdcpni
• optimizationcontrolmechanism.py:
a3c0f6c 
  added feature_input_ports attribute and num_feature_input_ports property
@jdcpni
• optimizationcontrolmechanism.py:
7069b3a 
  added feature_input_ports attribute and num_feature_input_ports property

• parameterestimationcomposition.py: fixed misplacement of its Parameters() attribute
@jdcpni
• optimizationcontrolmechanism.py:
65b960e 
  added feature_input_ports attribute and num_feature_input_ports property

• parameterestimationcomposition.py: fixed misplacement of its Parameters() attribute

• optimizationfunctions.py: made num_estimates a Parameter
@jdcpni
Merge branch 'devel' of https://github.com/PrincetonUniversity/PsyNeu…
5cc58f6 
…Link into feat/ocm/feature_input_ports
@jdcpni
Merge branch 'devel' of https://github.com/PrincetonUniversity/PsyNeu…
bc05b51 
…Link into devel
@jdcpni
- modified test_mode_based_num_estimates
a8d428b
@jdcpni
-
1218b6f
@jdcpni
-
41567bb
@jdcpni
Merge branch 'devel' of https://github.com/PrincetonUniversity/PsyNeu…
b65650f 
…Link into feat/ocm/feature_input_ports
@jdcpni
• optimizationcontrolmechanism.py:
822742f 
  - _instantiate_control_signals: random_seeds -> random_seed_mod_values
@jdcpni
• composition.py
5a3efba 
  - _add_controller:  modifying to instantiate feature_input_ports if none are specified
@jdcpni
• composition.py:
7acdebd 
  - add_controller:  now adds feature_input_ports for Compostion INPUT nodes if not state_features not specified
@jdcpni
-
f81baf5
@jdcpni
• composition.py
cc1e98e 
  - _add_controller:  modifying to instantiate feature_input_ports if none are specified
@jdcpni
• composition.py:
a00b95f 
  - add_controller:  assign simulation_input_ports
@jdcpni
-
ed0a720
@jdcpni
• optimizationcontrolmechanism.py:
cb0b930 
  - feature_input_ports -> state_input_ports
  - _instantiate_input_ports():
      state_features only allowed to specifying state_input_ports if
      agent_rep is a CompositionFunctionApproximator (i.e., model-free optimization)

• composition.py:
  - add_controller: adds state_input_ports to shadow INPUT Nodes of Composition
    if controller.agent_rep is Composition (model-based optimziation)
    or state_features have not been specified (for model-free optimizaton)
@jdcpni
-
8cadf24
@jdcpni
• optimizationcontrolmechanism.py:
1cc216e 
  _instantiate_input_ports:
     reinstate allowance of state_features specification if agent_rep is a Composition
     (i.e., model-based optimization) as long as they are all INPUT Nodes of agent_rep
@jdcpni
-
ba278c1
@jdcpni
-
b5f1c66
@jdcpni
Merge branch 'devel' of https://github.com/PrincetonUniversity/PsyNeu…
0e38f1b 
…Link into devel
@jdcpni
• optimizationcontrolmechanism.py
b4a9b82 
  - _gen_llvm_evaluate_function: num_estimates -> num_estimates_per_trial
-
2050118
@jdcpni
• optimizationcontrolmechanism.py
b925dab 
  - _gen_llvm_evaluate_function: num_estimates -> num_trial_per_estimate
@jdcpni
Merge branch 'refactor/ocm/state_input_ports' of https://github.com/P…
bdb12fb 
…rincetonUniversity/PsyNeuLink into refactor/ocm/state_input_ports

� Conflicts:
�	psyneulink/core/components/mechanisms/modulatory/control/optimizationcontrolmechanism.py
@jdcpni
• optimizationcontrolmechanism.py
c1b3000 
  - _gen_llvm_evaluate_function: num_estimates -> num_trials_per_estimate
@jdcpni
-
7ca8a0b
@jdcpni
-
d1010fd
@jdcpni
Merge branch 'devel' of https://github.com/PrincetonUniversity/PsyNeu…
e57cd2d 
…Link into refactor/ocm/state_input_ports
jdcpni and others added 25 commits December 13, 2021 05:57
@jdcpni
• CompositionInterfaceMechanism.rst:
dd8d944 
  - correct path ref

• compositioninterfacemechanism.py:
  - docstring fixes
@jdcpni
Merge branch 'devel' of https://github.com/PrincetonUniversity/PsyNeu…
b02a3a9 
…Link into devel

� Conflicts:
�	psyneulink/core/components/mechanisms/processing/compositioninterfacemechanism.py
@jdcpni
Merge branch 'devel' of https://github.com/PrincetonUniversity/PsyNeu…
a770345 
…Link into devel
@jdcpni
-
5f4c621
-
ff96663
• test_control.py:
613650d 
  - add test_warning_for_add_controller_twice()
  - add test_warning_for_controller_assigned_to_another_comp()
• test_control.py:
f70a98c 
  - add test_warning_for_replacement_of_controller()
-
721e94d
@jdcpni
-
735ceec
@jdcpni
Merge branch 'devel' of https://github.com/PrincetonUniversity/PsyNeu…
90a7b82 
…Link into docs/misc/jdc
@jdcpni
• composition.py
b1efef8 
  - _check_for_unused_projections(): fix crash for projections in deferred_init
  - _check_controller_initialization_status(): edited warning message
  - _add_node_aux_components(): add projections in deferred_init to invalid_aux_components
@jdcpni
• test_control.py:
51e92b4 
  - add test_add_node_with_controller_spec_and_control_mech_but_not_a_controller()
@jdcpni
• test_control.py:
194bc48 
  = add test_bad_objective_mechanism_spec()
@jdcpni
• test_control.py:
fb52bb7 
  = add test_bad_objective_mechanism_spec()
@jdcpni
Merge branch 'devel' of https://github.com/PrincetonUniversity/PsyNeu…
3a9d596 
…Link into fix/comp/proj_warnings

� Conflicts:
�	tests/composition/test_control.py
@jdcpni
Merge branch 'devel' of https://github.com/PrincetonUniversity/PsyNeu…
b410018 
…Link into docs/misc/jdc
@jdcpni
-
b3e3c08
@jdcpni
Merge branch 'fix/comp/proj_warnings' into docs/misc/jdc
304da3f
@jdcpni
• optimizationcontrolmechanism.py: update figure in docstring
4484124
@jdcpni
• optimizationcontrolmechanism.py: document state_features attribute
a4e2ae8
@jdcpni
• optimizationcontrolmechanism.py:
732d422 
  - docs:
    - document state_feature_attribute
    - update figure
  - implement state property
  - _update_state_input_ports_for_controller():
     fix bug in which assignment of OutputPort as state_feature caused crash
@jdcpni
• composition.py:
b6a360c 
  - _get_total_cost_of_control_allocation():
       add get_controller to find controller for which self (Composition) is the agent_rep
@jdcpni
• show_graph.py
64a5ba2 
  - show_graph(): add show_all option
@jdcpni
-
e34e5f1
@jdcpni
Merge branch 'devel' of https://github.com/PrincetonUniversity/PsyNeu…
4f39a85 
…Link into fix/ocm/misc
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Copy link

github-actions bot commented Jan 1, 2022

This PR causes the following changes to the html docs (ubuntu-latest-3.7-x64):

diff -r docs-base/OptimizationControlMechanism.html docs-head/OptimizationControlMechanism.html
345c345
< <a class="reference internal image-reference" href="_images/Optimization_fig.svg"><img alt="OptimizationControlMechanism" src="_images/Optimization_fig.svg" /></a>
---
> <a class="reference internal image-reference" href="_static/Optimization_fig.svg"><img alt="OptimizationControlMechanism" src="_static/Optimization_fig.svg" /></a>
884,885c884,885
< one of its subclasses, or it has not been assigned (None); see <a class="reference internal" href="#optimizationcontrolmechanism-agent-representation-types"><span class="std std-ref">Agent Representation and Types
< of Optimization</span></a> for additional details.</p>
---
> one of its subclasses, or it has not been assigned (None) (see <a class="reference internal" href="#optimizationcontrolmechanism-agent-representation-types"><span class="std std-ref">Agent Representation and Types
> of Optimization</span></a> for additional details).</p>
888a889,901
> </dd>
> </dl>
> </dd></dl>
> 
> <dl class="py attribute">
> <dt class="sig sig-object py" id="psyneulink.core.components.mechanisms.modulatory.control.optimizationcontrolmechanism.OptimizationControlMechanism.state_features">
> <span class="sig-name descname"><span class="pre">state_features</span></span><a class="headerlink" href="#psyneulink.core.components.mechanisms.modulatory.control.optimizationcontrolmechanism.OptimizationControlMechanism.state_features" title="Permalink to this definition">¶</a></dt>
> <dd><p>lists the specifications provided to the <strong>state_features</strong> argument of the OptimizationControlMechanism’s
> constructor, that are used to generate the inputs to <a class="reference internal" href="#psyneulink.core.components.mechanisms.modulatory.control.optimizationcontrolmechanism.OptimizationControlMechanism.state_input_ports" title="psyneulink.core.components.mechanisms.modulatory.control.optimizationcontrolmechanism.OptimizationControlMechanism.state_input_ports"><code class="xref any py py-attr docutils literal notranslate"><span class="pre">state_input_ports</span></code></a> (see <a class="reference internal" href="#optimizationcontrolmechanism-state-features"><span class="std std-ref">state_input_ports</span></a> for
> additional details).</p>
> <dl class="field-list simple">
> <dt class="field-odd">Type</dt>
> <dd class="field-odd"><p>List[Mechanism, <a class="reference internal" href="InputPort.html#psyneulink.core.components.ports.inputport.InputPort" title="psyneulink.core.components.ports.inputport.InputPort">InputPort</a>, or <a class="reference internal" href="OutputPort.html#psyneulink.core.components.ports.outputport.OutputPort" title="psyneulink.core.components.ports.outputport.OutputPort">OutputPort</a>, Projection, or dict]</p>
diff -r docs-base/Visualization.html docs-head/Visualization.html
445c445
< <span class="sig-name descname"><span class="pre">show_graph</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">show_node_structure</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_nested</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'nested'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_nested_args</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'all'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_cim</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_controller</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_learning</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_headers</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_types</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_dimensions</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_projection_labels</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_projections_not_in_composition</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">active_items</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">output_fmt</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'pdf'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">context</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#psyneulink.core.compositions.showgraph.ShowGraph.show_graph" title="Permalink to this definition">¶</a></dt>
---
> <span class="sig-name descname"><span class="pre">show_graph</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">show_all</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_node_structure</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_nested</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'nested'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_nested_args</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'all'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_cim</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_controller</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_learning</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_headers</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_types</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_dimensions</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_projection_labels</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_projections_not_in_composition</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">active_items</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">output_fmt</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'pdf'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">context</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">*</span></span><span class="n"><span class="pre">args</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#psyneulink.core.compositions.showgraph.ShowGraph.show_graph" title="Permalink to this definition">¶</a></dt>
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> <li><p><strong>show_all</strong> (<em>bool : default False</em>) – if False, defer to specification of all other arguments;  if True, override all show_XXX arguments,
> automatically specifying them with their most informative settings.</p></li>
Only in docs-base/_images: Optimization_fig.svg
Only in docs-base/_static: Optimization_fig.svg
Only in docs-head/_static: Optimization_fig_BAK.svg
diff -r docs-base/genindex.html docs-head/genindex.html
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<   </ul></td>
<   <td style="width: 33%; vertical-align: top;"><ul>
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>   </ul></td>
>   <td style="width: 33%; vertical-align: top;"><ul>
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> </li>
>       <li><a href="OptimizationControlMechanism.html#psyneulink.core.components.mechanisms.modulatory.control.optimizationcontrolmechanism.OptimizationControlMechanism.state_features">state_features (psyneulink.core.components.mechanisms.modulatory.control.optimizationcontrolmechanism.OptimizationControlMechanism attribute)</a>
Binary files docs-base/objects.inv and docs-head/objects.inv differ
diff -r docs-base/searchindex.js docs-head/searchindex.js
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...

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github-actions bot commented Jan 1, 2022

This PR causes the following changes to the html docs (ubuntu-latest-3.7-x64):

diff -r docs-base/OptimizationControlMechanism.html docs-head/OptimizationControlMechanism.html
345c345
< <a class="reference internal image-reference" href="_images/Optimization_fig.svg"><img alt="OptimizationControlMechanism" src="_images/Optimization_fig.svg" /></a>
---
> <a class="reference internal image-reference" href="_static/Optimization_fig.svg"><img alt="OptimizationControlMechanism" src="_static/Optimization_fig.svg" /></a>
884,885c884,885
< one of its subclasses, or it has not been assigned (None); see <a class="reference internal" href="#optimizationcontrolmechanism-agent-representation-types"><span class="std std-ref">Agent Representation and Types
< of Optimization</span></a> for additional details.</p>
---
> one of its subclasses, or it has not been assigned (None) (see <a class="reference internal" href="#optimizationcontrolmechanism-agent-representation-types"><span class="std std-ref">Agent Representation and Types
> of Optimization</span></a> for additional details).</p>
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> </dd>
> </dl>
> </dd></dl>
> 
> <dl class="py attribute">
> <dt class="sig sig-object py" id="psyneulink.core.components.mechanisms.modulatory.control.optimizationcontrolmechanism.OptimizationControlMechanism.state_features">
> <span class="sig-name descname"><span class="pre">state_features</span></span><a class="headerlink" href="#psyneulink.core.components.mechanisms.modulatory.control.optimizationcontrolmechanism.OptimizationControlMechanism.state_features" title="Permalink to this definition">¶</a></dt>
> <dd><p>lists the specifications provided to the <strong>state_features</strong> argument of the OptimizationControlMechanism’s
> constructor, that are used to generate the inputs to <a class="reference internal" href="#psyneulink.core.components.mechanisms.modulatory.control.optimizationcontrolmechanism.OptimizationControlMechanism.state_input_ports" title="psyneulink.core.components.mechanisms.modulatory.control.optimizationcontrolmechanism.OptimizationControlMechanism.state_input_ports"><code class="xref any py py-attr docutils literal notranslate"><span class="pre">state_input_ports</span></code></a> (see <a class="reference internal" href="#optimizationcontrolmechanism-state-features"><span class="std std-ref">state_input_ports</span></a> for
> additional details).</p>
> <dl class="field-list simple">
> <dt class="field-odd">Type</dt>
> <dd class="field-odd"><p>List[Mechanism, <a class="reference internal" href="InputPort.html#psyneulink.core.components.ports.inputport.InputPort" title="psyneulink.core.components.ports.inputport.InputPort">InputPort</a>, or <a class="reference internal" href="OutputPort.html#psyneulink.core.components.ports.outputport.OutputPort" title="psyneulink.core.components.ports.outputport.OutputPort">OutputPort</a>, Projection, or dict]</p>
diff -r docs-base/Visualization.html docs-head/Visualization.html
445c445
< <span class="sig-name descname"><span class="pre">show_graph</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">show_node_structure</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_nested</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'nested'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_nested_args</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'all'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_cim</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_controller</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_learning</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_headers</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_types</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_dimensions</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_projection_labels</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_projections_not_in_composition</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">active_items</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">output_fmt</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'pdf'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">context</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#psyneulink.core.compositions.showgraph.ShowGraph.show_graph" title="Permalink to this definition">¶</a></dt>
---
> <span class="sig-name descname"><span class="pre">show_graph</span></span><span class="sig-paren">(</span><em class="sig-param"><span class="n"><span class="pre">show_all</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_node_structure</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_nested</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'nested'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_nested_args</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'all'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_cim</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_controller</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_learning</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_headers</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">True</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_types</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_dimensions</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_projection_labels</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">show_projections_not_in_composition</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">False</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">active_items</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">output_fmt</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">'pdf'</span></span></em>, <em class="sig-param"><span class="n"><span class="pre">context</span></span><span class="o"><span class="pre">=</span></span><span class="default_value"><span class="pre">None</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">*</span></span><span class="n"><span class="pre">args</span></span></em>, <em class="sig-param"><span class="o"><span class="pre">**</span></span><span class="n"><span class="pre">kwargs</span></span></em><span class="sig-paren">)</span><a class="headerlink" href="#psyneulink.core.compositions.showgraph.ShowGraph.show_graph" title="Permalink to this definition">¶</a></dt>
455a456,457
> <li><p><strong>show_all</strong> (<em>bool : default False</em>) – if False, defer to specification of all other arguments;  if True, override all show_XXX arguments,
> automatically specifying them with their most informative settings.</p></li>
Only in docs-base/_images: Optimization_fig.svg
Only in docs-base/_static: Optimization_fig.svg
Only in docs-head/_static: Optimization_fig_BAK.svg
diff -r docs-base/genindex.html docs-head/genindex.html
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<   </ul></td>
<   <td style="width: 33%; vertical-align: top;"><ul>
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>   </ul></td>
>   <td style="width: 33%; vertical-align: top;"><ul>
5176a5177,5178
> </li>
>       <li><a href="OptimizationControlMechanism.html#psyneulink.core.components.mechanisms.modulatory.control.optimizationcontrolmechanism.OptimizationControlMechanism.state_features">state_features (psyneulink.core.components.mechanisms.modulatory.control.optimizationcontrolmechanism.OptimizationControlMechanism attribute)</a>
Binary files docs-base/objects.inv and docs-head/objects.inv differ
diff -r docs-base/searchindex.js docs-head/searchindex.js
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...

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@jdcpni jdcpni merged commit 05fcc78 into devel Jan 1, 2022
@jdcpni jdcpni deleted the fix/ocm/misc branch January 1, 2022 17:11
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3 participants
@jdcpni @jvesely @kmantel