update package / install info

LICENSE

@@ -1,29 +1,21 @@
-BSD 3-Clause License
+MIT License
 
-Copyright (c) 2020, Genevieve Buckley
-All rights reserved.
+Copyright (c) 2022 DeMarcoLab
 
-Redistribution and use in source and binary forms, with or without
-modification, are permitted provided that the following conditions are met:
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
 
-1. Redistributions of source code must retain the above copyright notice, this
-   list of conditions and the following disclaimer.
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
 
-2. Redistributions in binary form must reproduce the above copyright notice,
-   this list of conditions and the following disclaimer in the documentation
-   and/or other materials provided with the distribution.
-
-3. Neither the name of the copyright holder nor the names of its contributors
-   may be used to endorse or promote products derived from this software
-   without specific prior written permission.
-
-THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
-AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
-IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
-DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
-FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
-DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
-SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
-CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
-OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
-OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.

setup.cfg

@@ -1,12 +1,23 @@
-[versioneer]
-VCS = git
-style = pep440-post
-versionfile_source = liftout/_version.py
-versionfile_build = liftout/_version.py
-tag_prefix = v
+[metadata]
+name = autoliftout
+version = 0.0.1
+author = Patrick Cleeve
+author_email = [email protected]
+description = automated cryo-liftout
+long_description = file: README.md
+long_description_content_type = text/markdown
+url = https://github.com/DeMarcoLab/autoliftout
+project_urls =
+    Bug Tracker = https://github.com/DeMarcoLab/autoliftout/issues
+classifiers =
+    Programming Language :: Python :: 3
+    License :: OSI Approved :: MIT License
+    Operating System :: OS Independent
 
-[bdist_wheel]
-universal = 1
+[options]
+packages = find:
+python_requires = >=3.9
 
-[flake8]
-exclude = docs / conf.py
+[options.entry_points]
+console_scripts =
+    autoliftout_ui = autoliftout.gui.main:main

setup.py

@@ -1,63 +1,2 @@
-from os import path
-from setuptools import setup, find_packages
-import sys
-import versioneer
-
-
-# NOTE: This file must remain Python 2 compatible for the foreseeable future,
-# to ensure that we error out properly for people with outdated setuptools
-# and/or pip.
-min_version = (3, 6)
-if sys.version_info < min_version:
-    error = """
-liftout does not support Python {0}.{1}.
-Python {2}.{3} and above is required. Check your Python version like so:
-
-python3 --version
-
-This may be due to an out-of-date pip. Make sure you have pip >= 9.0.1.
-Upgrade pip like so:
-
-pip install --upgrade pip
-""".format(*(sys.version_info[:2] + min_version))
-    sys.exit(error)
-
-here = path.abspath(path.dirname(__file__))
-
-with open(path.join(here, 'README.md'), encoding='utf-8') as readme_file:
-    readme = readme_file.read()
-
-with open(path.join(here, 'requirements.txt')) as requirements_file:
-    # Parse requirements.txt, ignoring any commented-out lines.
-    requirements = [line for line in requirements_file.read().splitlines()
-                    if not line.startswith('#')]
-
-
-setup(
-    name='liftout',
-    version=versioneer.get_version(),
-    cmdclass=versioneer.get_cmdclass(),
-    description="Automated cryo-liftout for electron microscopy.",
-    long_description=readme,
-    author="Genevieve Buckley",
-    author_email='',
-    url='https://github.com/GenevieveBuckley/liftout',
-    python_requires='>={}'.format('.'.join(str(n) for n in min_version)),
-    packages=find_packages(exclude=['docs', 'tests']),
-    entry_points={"console_scripts": ["liftout = liftout.main:main_cli"]},
-    include_package_data=True,
-    package_data={
-        'liftout': [
-            # When adding files here, remember to update MANIFEST.in as well,
-            # or else they will not be included in the distribution on PyPI!
-            # 'path/to/data_file',
-        ]
-    },
-    install_requires=requirements,
-    license="BSD (3-clause)",
-    classifiers=[
-        'Development Status :: 2 - Pre-Alpha',
-        'Natural Language :: English',
-        'Programming Language :: Python :: 3',
-    ],
-)
+import setuptools
+setuptools.setup()