Indentification of Polymerase III-transcribed elements in genomic sequences
Pol3scan searches for the eukaryotic polymerase III transcription control elements B box, A box and terminator signal, discriminating between tRNA genes and tRNA-like elements (e.g. SINEs)
Refs:
Percudani R, Pavesi A, Ottonello S (1997). Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae. J Mol Biol. 1997 May 2;268(2):322-30.
Pavesi A, Conterio F, Bolchi A, Dieci G, Ottonello S (1994). Identification of new eukaryotic tRNA genes in genomic DNA databases by a multistep weight matrix analysis of transcriptional control regions. Nucleic Acids Res. Apr 11;22(7)