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clean-up
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meetagrawal09 committed Sep 5, 2024
1 parent d9ae803 commit eb896d1
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
name : Sipnet Model Run
name : Docker Stack Test
on :
pull_request:

Expand All @@ -9,7 +9,7 @@ on :
# run Thursday 4:30 AM UTC
- cron: '30 4 * * 4'
jobs:
test:
sipnet:
runs-on: ubuntu-latest

env:
Expand All @@ -19,12 +19,7 @@ jobs:
- name: Free Disk Space (Ubuntu)
uses: jlumbroso/free-disk-space@main
with:
# this might remove tools that are actually needed,
# if set to "true" but frees about 6 GB
tool-cache: false

# all of these default to true, but feel free to set to
# "false" if necessary for your workflow
android: true
dotnet: true
haskell: true
Expand Down Expand Up @@ -63,11 +58,11 @@ jobs:
run: |
docker compose up -d sipnet executor
- name: Check if containers are running # This will be updated soon to a loop
- name: Check if containers are running
run: |
docker ps
sleep 50
- name: Run SIPNET
run: |
docker compose exec --workdir /pecan/tests executor R CMD ../web/workflow.R --settings test.xml
docker compose exec --workdir /pecan/tests executor R CMD ../web/workflow.R --settings docker-ghaction.sipnet.xml
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