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arbitary push to trigger ci correctly
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WhalleyT committed Nov 10, 2023
1 parent 5126b23 commit cb0e6f9
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1 change: 0 additions & 1 deletion docker/Dockerfile.clockwork-0.9.7r1
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Expand Up @@ -18,7 +18,6 @@ stampy_version=1.0.32r3761 \
python_version=3.6.5 \
clockwork_version=2364dec4cbf25c844575e19e8fe0a319d10721b5


ENV PACKAGES="procps curl git build-essential wget zlib1g-dev pkg-config jq r-base-core rsync autoconf libncurses-dev libbz2-dev liblzma-dev libcurl4-openssl-dev cmake tabix libvcflib-tools libssl-dev software-properties-common perl locales locales-all" \
PYTHON="python2.7 python-dev"

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1 change: 0 additions & 1 deletion docker/Dockerfile.preprocessing-0.9.7r1
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Expand Up @@ -18,7 +18,6 @@ bwa_version=0.7.17 \
mash_version=2.3 \
fastani_version=1.33


ENV PACKAGES="procps curl git wget build-essential zlib1g-dev libncurses-dev libz-dev libbz2-dev liblzma-dev libcurl4-openssl-dev libgsl-dev rsync unzip ncbi-blast+ pigz jq libtbb-dev openjdk-11-jre-headless autoconf r-base-core locales locales-all" \
PYTHON="python3 python3-pip python3-dev" \
PYTHON_PACKAGES="biopython awscli"
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1 change: 0 additions & 1 deletion docker/Dockerfile.vcfpredict-0.9.7r1
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Expand Up @@ -15,7 +15,6 @@ tuberculosis_amr_catalogues=12d38733ad2e238729a3de9f725081e1d4872968
COPY bin/ /opt/bin/
ENV PATH=/opt/bin:$PATH


RUN apt-get update \
&& DEBIAN_FRONTEND=noninteractive TZ=Etc/UTC apt-get -y install tzdata \
&& apt-get install -y $PACKAGES $PYTHON \
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