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packaging must be >22
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WhalleyT committed Sep 4, 2024
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2 changes: 1 addition & 1 deletion docker/Dockerfile.ntmprofiler-0.9.9
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Expand Up @@ -26,7 +26,7 @@ RUN python3.12 -m ensurepip --upgrade
RUN python3.12 -m pip install --upgrade setuptools

#use pip to install ntm stuff
RUN python3.12 -m pip install pysam joblib tqdm pydantic jinja2 rich-argparse packaging
RUN python3.12 -m pip install pysam joblib tqdm pydantic jinja2 rich-argparse packaging>=22.0
RUN python3.12 -m pip install git+https://github.com/jodyphelan/pathogen-profiler.git@${PATHOGEN_PROFILER_VERSION}
RUN python3.12 -m pip install git+https://github.com/jodyphelan/ntm-profiler.git@${NTM_PROFILER_VERSION}

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