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v1.1.0 - new CRAN release
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@jchiquet jchiquet released this 09 Jan 07:55
· 121 commits to master since this release
v1.1.0
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Learn about vigilant mode.

PLNmodels 1.1.0 (2024-01-08)

  • Update documentation of PLN*_param() functions to include torch optimization parameters
  • Add (somehow) explicit error message when torch convergence fails
  • Change initialization in variance_jackknife() and variance_bootstrap() to prevent estimation recycling, results from those functions are now comparable to doing jackknife / bootstrap "by hand".
  • Merge PR #110 from Cole Trapnell to add:
    • bootstrap estimation of the variance of model parameter
    • improved interface for model initialization / optimisation parameters, which
      are now passed on to jackknife / bootstrap post-treatments
    • better support of GPU when using torch backend
  • Change behavior of predict() function for PLNfit model to (i) return fitted values if newdata is missing or (ii) perform one VE step to improve fit if responses are provided (fix issue #114)
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