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New monsoon sperber code in xCDAT #1011

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New monsoon sperber code in xCDAT #1011

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@bosup bosup commented Dec 21, 2023

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@bosup bosup marked this pull request as draft December 21, 2023 19:48
@bosup bosup linked an issue Dec 21, 2023 that may be closed by this pull request
@lee1043 lee1043 changed the title New monsoon sperber in xCDAT New monsoon sperber code in xCDAT Dec 21, 2023
@lee1043 lee1043 added this to the 3.3 milestone Dec 21, 2023
	new file:   ../doc/jupyter/Demo/cdms_param.py
	deleted:    ../doc/jupyter/Demo/demo_data/obs4MIPs_PCMDI-CEM2021_monthly_bySource_catalogue_v20210805_demo.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/cmip5_ACCESS1-0_historical_r1i1p1_monsoon_sperber_2000-2001.nc
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/cmip5_ACCESS1-0_historical_r1i1p1_monsoon_sperber_2000-2001.png
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/cmip5_ACCESS1-0_historical_r1i1p1_monsoon_sperber_2000-2002.nc
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/cmip5_ACCESS1-0_historical_r1i1p1_monsoon_sperber_2000-2002.png
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/cmip5_ACCESS1-0_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/cmip5_BCC-CSM1-1_historical_r1i1p1_monsoon_sperber_2000-2002.nc
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/cmip5_CCSM4_historical_r1i1p1_monsoon_sperber_2000-2002.nc
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/cmip5_CCSM4_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/cmip5_CanESM2_historical_r1i1p1_monsoon_sperber_2000-2002.nc
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/cmip5_CanESM2_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/cmip5_obs_historical_obs_monsoon_sperber_2000-2001.nc
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/cmip5_obs_historical_obs_monsoon_sperber_2000-2001.png
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/cmip5_obs_historical_obs_monsoon_sperber_2000-2002.nc
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/cmip5_obs_historical_obs_monsoon_sperber_2000-2002.png
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/cmip5_obs_historical_obs_monsoon_sperber_2000-2002_000.nc
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/cmip5_obs_historical_obs_monsoon_sperber_2000-2002_000.png
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_000_cmip5_historical_da_atm_2000-2002.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_000_cmip5_historical_da_atm_2000-2002_org_155395.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_000_cmip5_historical_da_atm_2000-2002_org_155622.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_000_cmip5_historical_da_atm_2000-2002_org_155889.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_000_cmip5_historical_da_atm_2000-2002_org_1742.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_000_cmip5_historical_da_atm_2000-2002_org_181420.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_000_cmip5_historical_da_atm_2000-2002_org_185482.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_000_cmip5_historical_da_atm_2000-2002_org_200057.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_000_cmip5_historical_da_atm_2000-2002_org_203643.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_000_cmip5_historical_da_atm_2000-2002_org_5334.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_cmip5_historical_da_atm_2000-2002.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_cmip5_historical_da_atm_2000-2002_org_147239.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_cmip5_historical_da_atm_2000-2002_org_148102.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_cmip5_historical_da_atm_2000-2002_org_156050.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_cmip5_historical_da_atm_2000-2002_org_185796.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_cmip5_historical_da_atm_2000-2002_org_185945.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_cmip5_historical_da_atm_2000-2002_org_186203.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_cmip5_historical_da_atm_2000-2002_org_1883.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_cmip5_historical_da_atm_2000-2002_org_2139.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_cmip5_historical_da_atm_2000-2002_org_2538.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_cmip5_historical_da_atm_2000-2002_org_2773.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1/monsoon_sperber_stat_cmip5_historical_da_atm_2000-2002_org_3239.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1_test/cmip5_ACCESS1-0_historical_r1i1p1_monsoon_sperber_2000-2001.nc
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1_test/cmip5_ACCESS1-0_historical_r1i1p1_monsoon_sperber_2000-2001.png
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1_test/cmip5_CCSM4_historical_r1i1p1_monsoon_sperber_2000-2001.nc
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1_test/cmip5_CCSM4_historical_r1i1p1_monsoon_sperber_2000-2001.png
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1_test/cmip5_CanESM2_historical_r1i1p1_monsoon_sperber_2000-2001.nc
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1_test/monsoon_sperber_stat_cmip5_historical_da_atm_2000-2002.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1_test/monsoon_sperber_stat_cmip5_historical_da_atm_2000-2002_org_4513.json
	new file:   ../doc/jupyter/Demo/demo_output/monsoon_sperber/Ex1_test/monsoon_sperber_stat_cmip5_historical_da_atm_2000-2002_org_5044.json
	new file:   ../doc/jupyter/Demo/test_ACCESS1-0_afterMask.png
	new file:   ../doc/jupyter/Demo/test_ACCESS1-0_beforeMask.png
	new file:   ../doc/jupyter/Demo/test_CCSM4_afterMask.png
	new file:   ../doc/jupyter/Demo/test_CCSM4_beforeMask.png
	new file:   ../doc/jupyter/Demo/test_obs_afterMask.png
	new file:   ../doc/jupyter/Demo/test_obs_beforeMask.png
	new file:   Untitled.ipynb
	modified:   __init__.py
	new file:   data_files.txt
	renamed:    monsoon_sperber/doc/monsoon_domain_map.png -> doc/monsoon_domain_map.png
	renamed:    monsoon_sperber/doc/plot_monsoon_domain.py -> doc/plot_monsoon_domain.py
	new file:   monsoon_old.zip
	new file:   monsoon_old/__init__.py
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/bk_000_all_cmip5.json
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_ACCESS1-0_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_ACCESS1-0_historical_r1i1p1_monsoon_sperber_2000-2002_000.png
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_ACCESS1-3_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_ACCESS1-3_historical_r1i1p1_monsoon_sperber_2000-2002_000.png
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_BCC-CSM1-1-M_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_BCC-CSM1-1-M_historical_r1i1p1_monsoon_sperber_2000-2002_000.png
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_BCC-CSM1-1_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_BCC-CSM1-1_historical_r1i1p1_monsoon_sperber_2000-2002_000.png
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_BNU-ESM_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_BNU-ESM_historical_r1i1p1_monsoon_sperber_2000-2002_000.png
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_CCSM4_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_CCSM4_historical_r1i1p1_monsoon_sperber_2000-2002_000.png
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_CESM1-BGC_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_CESM1-BGC_historical_r1i1p1_monsoon_sperber_2000-2002_000.png
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_CESM1-CAM5_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_CESM1-CAM5_historical_r1i1p1_monsoon_sperber_2000-2002_000.png
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_CESM1-FASTCHEM_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_CESM1-FASTCHEM_historical_r1i1p1_monsoon_sperber_2000-2002_000.png
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_CMCC-CESM_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_CMCC-CESM_historical_r1i1p1_monsoon_sperber_2000-2002_000.png
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_CMCC-CMS_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
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	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_CSIRO-Mk3-6-0_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_CSIRO-Mk3-6-0_historical_r1i1p1_monsoon_sperber_2000-2002_000.png
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_CanCM4_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
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	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_CanESM2_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_EC-EARTH_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
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	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_FGOALS-g2_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
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	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_GFDL-CM3_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
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	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_HadGEM2-AO_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
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	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_HadGEM2-ES_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
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	new file:   monsoon_old/demo_output/monsoon_sperber/Ex1/cmip5_INMCM4_historical_r1i1p1_monsoon_sperber_2000-2002_000.nc
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	new file:   monsoon_sperber_original/doc/plot_monsoon_domain.py
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	new file:   monsoon_sperber_original/lib/__init__.py
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	new file:   monsoon_sperber_original/param/myParam.py
	new file:   untitled
	new file:   ../pcmdi_utils
	modified:   ../share/DefArgsCIA.json
@bosup bosup marked this pull request as ready for review January 8, 2024 23:49
bosup and others added 3 commits January 13, 2024 23:15
	modified:   ../../cmec/scripts/pmp_param_generator.py
	modified:   ../../conda-env/dev.yml
	modified:   ../../contents.json
	modified:   ../../doc/jupyter/Demo/Demo_0_download_data.ipynb
	modified:   ../../docs/metrics.rst
	deleted:    ../monsoon_old/__init__.py
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	deleted:    ../monsoon_sperber_original/lib/calc_metrics.py
	deleted:    ../monsoon_sperber_original/lib/divide_chunks.py
	deleted:    ../monsoon_sperber_original/lib/model_land_only.py
	deleted:    ../monsoon_sperber_original/param/myParam.py
	modified:   ../variability_mode/variability_modes_driver.py
	modified:   ../../setup.py

 Untracked files:
   (use "git add <file>..." to include in what will be committed)

	../../cmec/extremes/
	../../doc/jupyter/Demo/Demo_8_extremes.ipynb
	../../doc/jupyter/Demo/basic_extremes_param.py.in
	../../docs/metrics_ext.rst
	../extremes/
	../graphics/portrait_plot/return_value_portrait_plot_demo.ipynb
	../../tests/test_extremes.py
	new file:   ../../doc/jupyter/Demo/Demo_8_extremes.ipynb
	new file:   ../../doc/jupyter/Demo/basic_extremes_param.py.in
	new file:   ../../docs/metrics_ext.rst
	new file:   ../extremes/README.md
	new file:   ../extremes/__init__.py
	new file:   ../extremes/extremes_driver.py
	new file:   ../extremes/lib/__init__.py
	new file:   ../extremes/lib/compute_metrics.py
	new file:   ../extremes/lib/create_extremes_parser.py
	new file:   ../extremes/lib/metadata.py
	new file:   ../extremes/lib/plot_extremes.py
	new file:   ../extremes/lib/region_utilities.py
	new file:   ../extremes/lib/return_value.py
	new file:   ../extremes/lib/utilities.py
	new file:   ../extremes/param/daily_model_data.py
	new file:   ../graphics/portrait_plot/return_value_portrait_plot_demo.ipynb
	new file:   ../../tests/test_extremes.py
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lee1043 commented Jan 16, 2024

I am closing this PR as it is followed up by a cleaned new PR #1022.

@lee1043 lee1043 closed this Jan 16, 2024
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Implement xCDAT for PMP's Monsoon Sperber Metrics
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