Skip to content

Commit

Permalink
Jupyter docker: new build for RavenPy 0.12.1 (#119)
Browse files Browse the repository at this point in the history
## Changes

- Rename `raven` folder in deployed tutorial notebooks on PAVICS to
`hydro`.
- Pull latest RavenPy 0.12.1
- Relevant changes (alphabetical order):
```diff
<   - datashader=0.14.4=pyh1a96a4e_0
>   - datashader=0.15.0=pyhd8ed1ab_0

<   - ravenpy=0.12.0=py39hf3d152e_2
>   - ravenpy=0.12.1=py39hf3d152e_0

<   - regionmask=0.9.0=pyhd8ed1ab_0
>   - regionmask=0.10.0=pyhd8ed1ab_0

```

## Tests

* Deployed as "beta" image in production for bokeh visualization
performance regression testing.
* Manual test notebook
https://github.com/Ouranosinc/PAVICS-landing/blob/master/content/notebooks/climate_indicators/PAVICStutorial_ClimateDataAnalysis-5Visualization.ipynb
for bokeh visualization performance and it looks fine.
* Jenkins build, all passed, known intermittent error only:

*
[job-PAVICS-e2e-workflow-tests-new-docker-build-211-consoleText.txt](https://github.com/Ouranosinc/PAVICS-e2e-workflow-tests/files/11636596/job-PAVICS-e2e-workflow-tests-new-docker-build-211-consoleText.txt)

*
[Raven-job-PAVICS-e2e-workflow-tests-new-docker-build-213-consoleText.txt](https://github.com/Ouranosinc/PAVICS-e2e-workflow-tests/files/11636598/Raven-job-PAVICS-e2e-workflow-tests-new-docker-build-213-consoleText.txt)



## Related Issue / Discussion

* No notebook changes required.

* Deployment to PAVICS:
bird-house/birdhouse-deploy#337

* Previous release:
#115

## Additional Information

Full diff conda env export:

[230530-1-230601-dev-conda-env-export.diff.txt](https://github.com/Ouranosinc/PAVICS-e2e-workflow-tests/files/11636551/230530-1-230601-dev-conda-env-export.diff.txt)
```diff
77c77
<   - cattrs=22.2.0=pyhd8ed1ab_0
---
>   - cattrs=23.1.1=pyhd8ed1ab_0
103c103
<   - cryptography=40.0.2=py39h079d5ae_0
---
>   - cryptography=41.0.0=py39hd4f0224_0
107c107
<   - dash=2.9.3=pyhd8ed1ab_2
---
>   - dash=2.10.0=pyhd8ed1ab_0
112c112
<   - datashader=0.14.4=pyh1a96a4e_0
---
>   - datashader=0.15.0=pyhd8ed1ab_0
254c254
<   - jupyter_ydoc=0.2.3=pyhd8ed1ab_0
---
>   - jupyter_ydoc=0.2.4=pyhd8ed1ab_0
257c257
<   - jupyterlab=3.6.3=pyhd8ed1ab_0
---
>   - jupyterlab=3.6.4=pyhd8ed1ab_0
403c403
<   - nbformat=5.8.0=pyhd8ed1ab_0
---
>   - nbformat=5.9.0=pyhd8ed1ab_0
420c420
<   - numba=0.57.0=py39hb75a051_0
---
>   - numba=0.57.0=py39hb75a051_1
427c427
<   - openssl=3.1.1=hd590300_0
---
>   - openssl=3.1.1=hd590300_1
496c496
<   - pyopenssl=23.1.1=pyhd8ed1ab_0
---
>   - pyopenssl=23.2.0=pyhd8ed1ab_1
520c520
<   - pyzmq=25.0.2=py39h0be026e_0
---
>   - pyzmq=25.1.0=py39hb257651_0
527c527
<   - ravenpy=0.12.0=py39hf3d152e_2
---
>   - ravenpy=0.12.1=py39hf3d152e_0
531c531
<   - regionmask=0.9.0=pyhd8ed1ab_0
---
>   - regionmask=0.10.0=pyhd8ed1ab_0
543c543
<   - ruamel.yaml=0.17.30=py39hd1e30aa_0
---
>   - ruamel.yaml=0.17.31=py39hd1e30aa_0
599c599
<   - ucx=1.14.1=hf587318_1
---
>   - ucx=1.14.1=hf587318_2
```


Full new conda env export:

[230601-dev-conda-env-export.yml.txt](https://github.com/Ouranosinc/PAVICS-e2e-workflow-tests/files/11636553/230601-dev-conda-env-export.yml.txt)
```diff
name: birdy
channels:
  - cdat
  - conda-forge
  - defaults
dependencies:
  - _libgcc_mutex=0.1=conda_forge
  - _openmp_mutex=4.5=2_gnu
  - affine=2.4.0=pyhd8ed1ab_0
  - aiobotocore=2.5.0=pyhd8ed1ab_0
  - aiofiles=22.1.0=pyhd8ed1ab_0
  - aiohttp=3.8.4=py39h72bdee0_0
  - aioitertools=0.11.0=pyhd8ed1ab_0
  - aiosignal=1.3.1=pyhd8ed1ab_0
  - aiosqlite=0.19.0=pyhd8ed1ab_0
  - alembic=1.11.1=pyhd8ed1ab_0
  - alsa-lib=1.2.8=h166bdaf_0
  - altair=5.0.1=pyhd8ed1ab_0
  - ansi2html=1.8.0=py39hf3d152e_1
  - anyio=3.6.1=pyhd8ed1ab_1
  - aom=3.5.0=h27087fc_0
  - appdirs=1.4.4=pyh9f0ad1d_0
  - argon2-cffi=21.3.0=pyhd8ed1ab_0
  - argon2-cffi-bindings=21.2.0=py39hb9d737c_3
  - asciitree=0.3.3=py_2
  - astor=0.8.1=pyh9f0ad1d_0
  - asttokens=2.2.1=pyhd8ed1ab_0
  - async-timeout=4.0.2=pyhd8ed1ab_0
  - async_generator=1.10=py_0
  - attr=2.5.1=h166bdaf_1
  - attrs=23.1.0=pyh71513ae_1
  - aws-c-auth=0.6.27=he072965_1
  - aws-c-cal=0.5.26=hf677bf3_1
  - aws-c-common=0.8.19=hd590300_0
  - aws-c-compression=0.2.16=hbad4bc6_7
  - aws-c-event-stream=0.2.20=hb4b372c_7
  - aws-c-http=0.7.7=h2632f9a_4
  - aws-c-io=0.13.21=h9fef7b8_5
  - aws-c-mqtt=0.8.11=h2282364_1
  - aws-c-s3=0.3.0=hcb5a9b2_2
  - aws-c-sdkutils=0.1.9=hbad4bc6_2
  - aws-checksums=0.1.14=hbad4bc6_7
  - aws-crt-cpp=0.20.2=he0fdcb3_0
  - aws-sdk-cpp=1.10.57=h059227d_13
  - babel=2.12.1=pyhd8ed1ab_1
  - backcall=0.2.0=pyh9f0ad1d_0
  - backports=1.0=pyhd8ed1ab_3
  - backports.functools_lru_cache=1.6.4=pyhd8ed1ab_0
  - base58=2.1.1=pyhd8ed1ab_0
  - bcrypt=3.2.2=py39hb9d737c_1
  - beautifulsoup4=4.12.2=pyha770c72_0
  - bias_correction=0.4=pyhd8ed1ab_0
  - birdy=0.8.4=pyh1a96a4e_0
  - bleach=6.0.0=pyhd8ed1ab_0
  - blinker=1.6.2=pyhd8ed1ab_0
  - blosc=1.21.4=h0f2a231_0
  - bokeh=2.4.3=pyhd8ed1ab_3
  - boltons=23.0.0=pyhd8ed1ab_0
  - boost-cpp=1.78.0=h5adbc97_2
  - boto3=1.26.76=pyhd8ed1ab_0
  - botocore=1.29.76=pyhd8ed1ab_0
  - bottleneck=1.3.7=py39h389d5f1_0
  - branca=0.6.0=pyhd8ed1ab_0
  - brotli=1.0.9=h166bdaf_8
  - brotli-bin=1.0.9=h166bdaf_8
  - brotlipy=0.7.0=py39hb9d737c_1005
  - brunsli=0.1=h9c3ff4c_0
  - bzip2=1.0.8=h7f98852_4
  - c-ares=1.19.1=hd590300_0
  - c-blosc2=2.9.2=hb4ffafa_0
  - ca-certificates=2023.5.7=hbcca054_0
  - cached-property=1.5.2=hd8ed1ab_1
  - cached_property=1.5.2=pyha770c72_1
  - cachetools=5.3.0=pyhd8ed1ab_0
  - cairo=1.16.0=ha61ee94_1014
  - cartopy=0.21.1=py39h6e7ad6e_0
  - cattrs=23.1.1=pyhd8ed1ab_0
  - cdat_info=8.2.1=pyhd8ed1ab_2
  - cdms2=3.1.5=py39h36de48d_15
  - cdtime=3.1.4=py39he83c29a_7
  - certifi=2023.5.7=pyhd8ed1ab_0
  - certipy=0.1.3=py_0
  - cf_xarray=0.8.0=pyhd8ed1ab_0
  - cffi=1.15.1=py39he91dace_3
  - cfgrib=0.9.10.4=pyhd8ed1ab_0
  - cfgv=3.3.1=pyhd8ed1ab_0
  - cfitsio=4.2.0=hd9d235c_0
  - cftime=1.6.2=py39h2ae25f5_1
  - charls=2.4.2=h59595ed_0
  - charset-normalizer=2.1.1=pyhd8ed1ab_0
  - click=8.1.3=unix_pyhd8ed1ab_2
  - click-plugins=1.1.1=py_0
  - cligj=0.7.2=pyhd8ed1ab_1
  - climpred=2.3.0=pyhd8ed1ab_0
  - clisops=0.9.6=pyh1a96a4e_0
  - cloudpickle=2.2.1=pyhd8ed1ab_0
  - colorama=0.4.6=pyhd8ed1ab_0
  - colorcet=3.0.1=pyhd8ed1ab_0
  - comm=0.1.3=pyhd8ed1ab_0
  - configurable-http-proxy=4.5.4=he2f69ee_2
  - contourpy=1.0.7=py39h4b4f3f3_0
  - coverage=7.2.7=py39hd1e30aa_0
  - cryptography=41.0.0=py39hd4f0224_0
  - curl=8.1.2=h409715c_0
  - cycler=0.11.0=pyhd8ed1ab_0
  - cytoolz=0.12.0=py39hb9d737c_1
  - dash=2.10.0=pyhd8ed1ab_0
  - dask=2023.5.1=pyhd8ed1ab_0
  - dask-core=2023.5.1=pyhd8ed1ab_0
  - dask-labextension=6.1.0=pyhd8ed1ab_0
  - dataclasses=0.8=pyhc8e2a94_3
  - datashader=0.15.0=pyhd8ed1ab_0
  - datashape=0.5.4=py_1
  - dav1d=1.2.0=hd590300_0
  - dbus=1.13.6=h5008d03_3
  - debugpy=1.6.7=py39h227be39_0
  - decorator=5.1.1=pyhd8ed1ab_0
  - defusedxml=0.7.1=pyhd8ed1ab_0
  - descartes=1.1.0=py_4
  - dill=0.3.6=pyhd8ed1ab_1
  - distarray=2.12.2=pyh050c7b8_4
  - distlib=0.3.6=pyhd8ed1ab_0
  - distributed=2023.5.1=pyhd8ed1ab_0
  - docopt=0.6.2=py_1
  - docrep=0.3.2=pyh44b312d_0
  - eccodes=2.28.0=h7513371_1
  - elfutils=0.189=hde5d1a3_0
  - entrypoints=0.4=pyhd8ed1ab_0
  - eofs=1.4.0=py_0
  - esgf-compute-api=2.3.9=0_h1234567_
  - esgf-pyclient=0.3.1=pyh1a96a4e_2
  - esmf=8.4.0=mpi_mpich_hc592774_104
  - esmpy=8.4.0=mpi_mpich_py39h3088dd8_102
  - exceptiongroup=1.1.1=pyhd8ed1ab_0
  - execnet=1.9.0=pyhd8ed1ab_0
  - executing=1.2.0=pyhd8ed1ab_0
  - expat=2.5.0=hcb278e6_1
  - fasteners=0.17.3=pyhd8ed1ab_0
  - fastprogress=1.0.3=pyhd8ed1ab_0
  - fftw=3.3.10=nompi_hc118613_107
  - filelock=3.12.0=pyhd8ed1ab_0
  - findlibs=0.0.5=pyhd8ed1ab_0
  - fiona=1.9.1=py39hbc5ff6d_0
  - flask=2.3.2=pyhd8ed1ab_0
  - flit-core=3.9.0=pyhd8ed1ab_0
  - flox=0.7.2=pyhd8ed1ab_0
  - folium=0.14.0=pyhd8ed1ab_0
  - font-ttf-dejavu-sans-mono=2.37=hab24e00_0
  - font-ttf-inconsolata=3.000=h77eed37_0
  - font-ttf-source-code-pro=2.038=h77eed37_0
  - font-ttf-ubuntu=0.83=hab24e00_0
  - fontconfig=2.14.2=h14ed4e7_0
  - fonts-conda-ecosystem=1=0
  - fonts-conda-forge=1=0
  - fonttools=4.39.4=py39hd1e30aa_0
  - freeglut=3.2.2=h9c3ff4c_1
  - freetype=2.12.1=hca18f0e_1
  - freexl=1.0.6=h166bdaf_1
  - frozenlist=1.3.3=py39hb9d737c_0
  - fsspec=2023.5.0=pyh1a96a4e_0
  - funcsigs=1.0.2=py_3
  - future=0.18.3=pyhd8ed1ab_0
  - g2clib=1.6.3=hbecde78_1
  - gcsfs=2023.5.0=pyhd8ed1ab_0
  - gdal=3.6.2=py39hc6cd174_6
  - geckodriver=0.33.0=hd2f7af9_0
  - geographiclib=1.52=pyhd8ed1ab_0
  - geopandas=0.13.0=pyhd8ed1ab_0
  - geopandas-base=0.13.0=pyha770c72_0
  - geopy=2.3.0=pyhd8ed1ab_0
  - geos=3.11.1=h27087fc_0
  - geotiff=1.7.1=h7a142b4_6
  - geoviews=1.9.6=pyhd8ed1ab_0
  - geoviews-core=1.9.6=pyha770c72_0
  - gettext=0.21.1=h27087fc_0
  - gflags=2.2.2=he1b5a44_1004
  - giflib=5.2.1=h0b41bf4_3
  - gitdb=4.0.10=pyhd8ed1ab_0
  - gitpython=3.1.31=pyhd8ed1ab_0
  - glib=2.76.3=hfc55251_0
  - glib-tools=2.76.3=hfc55251_0
  - glog=0.6.0=h6f12383_0
  - gnutls=3.7.8=hf3e180e_0
  - google-api-core=2.11.0=pyhd8ed1ab_0
  - google-auth=2.19.0=pyh1a96a4e_0
  - google-auth-oauthlib=1.0.0=pyhd8ed1ab_0
  - google-cloud-core=2.3.2=pyhd8ed1ab_0
  - google-cloud-storage=2.9.0=pyh1a96a4e_0
  - google-crc32c=1.1.2=py39h8db88ab_4
  - google-resumable-media=2.5.0=pyhd8ed1ab_0
  - googleapis-common-protos=1.57.1=pyhd8ed1ab_0
  - graphite2=1.3.13=h58526e2_1001
  - greenlet=2.0.2=py39h3d6467e_1
  - grpcio=1.54.2=py39h227be39_2
  - gst-plugins-base=1.22.0=h4243ec0_2
  - gstreamer=1.22.0=h25f0c4b_2
  - gstreamer-orc=0.4.34=hd590300_0
  - h11=0.14.0=pyhd8ed1ab_0
  - h5netcdf=1.1.0=pyhd8ed1ab_1
  - h5py=3.8.0=mpi_mpich_py39hadaddcd_0
  - harfbuzz=6.0.0=h8e241bc_0
  - haversine=2.8.0=pyhd8ed1ab_0
  - hdf4=4.2.15=h9772cbc_5
  - hdf5=1.12.2=mpi_mpich_h5d83325_1
  - holoviews=1.16.0=pyhd8ed1ab_0
  - hvplot=0.8.3=pyhd8ed1ab_0
  - icu=70.1=h27087fc_0
  - identify=2.5.24=pyhd8ed1ab_0
  - idna=3.4=pyhd8ed1ab_0
  - imagecodecs=2023.1.23=py39hd061359_0
  - imageio=2.28.1=pyh24c5eb1_0
  - importlib-metadata=6.6.0=pyha770c72_0
  - importlib-resources=5.12.0=pyhd8ed1ab_0
  - importlib_metadata=6.6.0=hd8ed1ab_0
  - importlib_resources=5.12.0=pyhd8ed1ab_0
  - iniconfig=2.0.0=pyhd8ed1ab_0
  - intake=0.7.0=pyhd8ed1ab_0
  - intake-esm=2021.8.17=pyhd8ed1ab_0
  - intake-geopandas=0.4.0=pyhd8ed1ab_0
  - intake-thredds=2022.8.19=pyhd8ed1ab_0
  - intake-xarray=0.7.0=pyhd8ed1ab_0
  - ipykernel=6.23.1=pyh210e3f2_0
  - ipyleaflet=0.17.2=pyhd8ed1ab_0
  - ipython=8.13.2=pyh41d4057_0
  - ipython_genutils=0.2.0=py_1
  - ipywidgets=8.0.6=pyhd8ed1ab_0
  - itsdangerous=2.1.2=pyhd8ed1ab_0
  - jack=1.9.22=h11f4161_0
  - jasper=2.0.33=h0ff4b12_1
  - jedi=0.18.2=pyhd8ed1ab_0
  - jinja2=3.1.2=pyhd8ed1ab_1
  - jmespath=1.0.1=pyhd8ed1ab_0
  - joblib=1.2.0=pyhd8ed1ab_0
  - jpeg=9e=h0b41bf4_3
  - json-c=0.16=hc379101_0
  - json5=0.9.5=pyh9f0ad1d_0
  - jsonpickle=2.2.0=pyhd8ed1ab_0
  - jsonschema=4.17.3=pyhd8ed1ab_0
  - jupyter=1.0.0=py39hf3d152e_8
  - jupyter-archive=3.3.4=pyhd8ed1ab_1
  - jupyter-dash=0.4.2=pyhd8ed1ab_1
  - jupyter-resource-usage=0.7.1=pyhd8ed1ab_0
  - jupyter-server-mathjax=0.2.6=pyh5bfe37b_1
  - jupyter-server-proxy=4.0.0=pyhd8ed1ab_0
  - jupyter_bokeh=3.0.5=pyhd8ed1ab_0
  - jupyter_client=7.4.1=pyhd8ed1ab_0
  - jupyter_console=6.6.3=pyhd8ed1ab_0
  - jupyter_core=5.3.0=py39hf3d152e_0
  - jupyter_events=0.6.3=pyhd8ed1ab_0
  - jupyter_server=1.23.6=pyhd8ed1ab_0
  - jupyter_server_fileid=0.9.0=pyhd8ed1ab_0
  - jupyter_server_ydoc=0.8.0=pyhd8ed1ab_0
  - jupyter_telemetry=0.1.0=pyhd8ed1ab_1
  - jupyter_ydoc=0.2.4=pyhd8ed1ab_0
  - jupyterhub=4.0.0=pyh2a2186d_0
  - jupyterhub-base=4.0.0=pyh2a2186d_0
  - jupyterlab=3.6.4=pyhd8ed1ab_0
  - jupyterlab-git=0.41.0=pyhd8ed1ab_1
  - jupyterlab-system-monitor=0.8.0=pyhd8ed1ab_2
  - jupyterlab-topbar=0.6.1=pyhd8ed1ab_2
  - jupyterlab_pygments=0.2.2=pyhd8ed1ab_0
  - jupyterlab_server=2.22.1=pyhd8ed1ab_0
  - jupyterlab_widgets=3.0.7=pyhd8ed1ab_1
  - jupytext=1.14.5=pyhcff175f_0
  - jxrlib=1.1=h7f98852_2
  - kealib=1.5.0=ha7026e8_0
  - keyutils=1.6.1=h166bdaf_0
  - kiwisolver=1.4.4=py39hf939315_1
  - krb5=1.20.1=h81ceb04_0
  - lame=3.100=h166bdaf_1003
  - lazy-object-proxy=1.9.0=py39h72bdee0_0
  - lazy_loader=0.2=pyhd8ed1ab_0
  - lcms2=2.15=hfd0df8a_0
  - ld_impl_linux-64=2.40=h41732ed_0
  - lerc=4.0.0=h27087fc_0
  - libabseil=20230125.2=cxx17_h59595ed_2
  - libaec=1.0.6=hcb278e6_1
  - libarchive=3.6.2=h3d51595_0
  - libarrow=10.0.1=hf815326_25_cpu
  - libavif=0.11.1=hff004cb_1
  - libblas=3.9.0=16_linux64_openblas
  - libbrotlicommon=1.0.9=h166bdaf_8
  - libbrotlidec=1.0.9=h166bdaf_8
  - libbrotlienc=1.0.9=h166bdaf_8
  - libcap=2.67=he9d0100_0
  - libcblas=3.9.0=16_linux64_openblas
  - libcdms=3.1.2=hf94f14b_119
  - libcf=1.0.3=py39h6c807ef_115
  - libclang=15.0.7=default_h7634d5b_2
  - libclang13=15.0.7=default_h9986a30_2
  - libcrc32c=1.1.2=h9c3ff4c_0
  - libcups=2.3.3=h36d4200_3
  - libcurl=8.1.2=h409715c_0
  - libdb=6.2.32=h9c3ff4c_0
  - libdeflate=1.17=h0b41bf4_0
  - libdrm=2.4.114=h166bdaf_0
  - libdrs=3.1.2=hf593df3_118
  - libdrs_f=3.1.2=h7e76ec7_114
  - libedit=3.1.20191231=he28a2e2_2
  - libev=4.33=h516909a_1
  - libevent=2.1.10=h28343ad_4
  - libexpat=2.5.0=hcb278e6_1
  - libffi=3.4.2=h7f98852_5
  - libflac=1.4.2=h27087fc_0
  - libgcc-ng=12.2.0=h65d4601_19
  - libgcrypt=1.10.1=h166bdaf_0
  - libgdal=3.6.2=h8c90c07_6
  - libgfortran-ng=12.2.0=h69a702a_19
  - libgfortran5=12.2.0=h337968e_19
  - libglib=2.76.3=hebfc3b9_0
  - libglu=9.0.0=he1b5a44_1001
  - libgomp=12.2.0=h65d4601_19
  - libgoogle-cloud=2.10.1=hac9eb74_1
  - libgpg-error=1.46=h620e276_0
  - libgrpc=1.54.2=hb20ce57_2
  - libiconv=1.17=h166bdaf_0
  - libidn2=2.3.4=h166bdaf_0
  - libkml=1.3.0=h37653c0_1015
  - liblapack=3.9.0=16_linux64_openblas
  - libllvm14=14.0.6=hcd5def8_2
  - libllvm15=15.0.7=hadd5161_1
  - libllvm16=16.0.1=hadd5161_0
  - libmicrohttpd=0.9.76=h87ba234_0
  - libnetcdf=4.8.1=mpi_mpich_hcd871d9_6
  - libnghttp2=1.52.0=h61bc06f_0
  - libnsl=2.0.0=h7f98852_0
  - libnuma=2.0.16=h0b41bf4_1
  - libogg=1.3.4=h7f98852_1
  - libopenblas=0.3.21=pthreads_h78a6416_3
  - libopus=1.3.1=h7f98852_1
  - libpciaccess=0.17=h166bdaf_0
  - libpng=1.6.39=h753d276_0
  - libpq=15.2=hb675445_0
  - libprotobuf=3.21.12=h3eb15da_0
  - librttopo=1.1.0=ha49c73b_12
  - libsndfile=1.2.0=hb75c966_0
  - libsodium=1.0.18=h36c2ea0_1
  - libspatialindex=1.9.3=h9c3ff4c_4
  - libspatialite=5.0.1=h221c8f1_23
  - libsqlite=3.42.0=h2797004_0
  - libssh2=1.10.0=hf14f497_3
  - libstdcxx-ng=12.2.0=h46fd767_19
  - libsystemd0=253=h8c4010b_1
  - libtasn1=4.19.0=h166bdaf_0
  - libthrift=0.18.1=h5e4af38_0
  - libtiff=4.5.0=h6adf6a1_2
  - libtool=2.4.7=h27087fc_0
  - libudev1=253=h0b41bf4_1
  - libunistring=0.9.10=h7f98852_0
  - libutf8proc=2.8.0=h166bdaf_0
  - libuuid=2.38.1=h0b41bf4_0
  - libuv=1.44.2=h166bdaf_0
  - libvorbis=1.3.7=h9c3ff4c_0
  - libwebp-base=1.3.0=h0b41bf4_0
  - libxcb=1.13=h7f98852_1004
  - libxkbcommon=1.5.0=h79f4944_1
  - libxml2=2.10.3=hca2bb57_4
  - libxslt=1.1.37=h873f0b0_0
  - libzip=1.9.2=hc929e4a_1
  - libzlib=1.2.13=h166bdaf_4
  - libzopfli=1.0.3=h9c3ff4c_0
  - llvmlite=0.40.0=py39h174d805_0
  - lmoments3=1.0.5=pyhd8ed1ab_0
  - locket=1.0.0=pyhd8ed1ab_0
  - loguru=0.7.0=py39hf3d152e_0
  - lxml=4.9.2=py39h14694de_0
  - lz4=4.3.2=py39h724f13c_0
  - lz4-c=1.9.4=hcb278e6_0
  - lzo=2.10=h516909a_1000
  - mako=1.2.4=pyhd8ed1ab_0
  - mamba_gator=5.2.1=pyhd8ed1ab_0
  - mapclassify=2.5.0=pyhd8ed1ab_1
  - markdown=3.4.3=pyhd8ed1ab_0
  - markdown-it-py=2.2.0=pyhd8ed1ab_0
  - markupsafe=2.1.2=py39h72bdee0_0
  - matplotlib=3.7.1=py39hf3d152e_0
  - matplotlib-base=3.7.1=py39he190548_0
  - matplotlib-inline=0.1.6=pyhd8ed1ab_0
  - mdit-py-plugins=0.3.5=pyhd8ed1ab_0
  - mdurl=0.1.0=pyhd8ed1ab_0
  - memory_profiler=0.61.0=pyhd8ed1ab_0
  - mesalib=23.0.2=h3855f93_0
  - mistune=2.0.5=pyhd8ed1ab_0
  - mpg123=1.31.3=hcb278e6_0
  - mpi=1.0=mpich
  - mpi4py=3.1.4=py39h32b9844_0
  - mpich=4.0.3=h846660c_100
  - msgpack-python=1.0.5=py39h4b4f3f3_0
  - multidict=6.0.4=py39h72bdee0_0
  - multipledispatch=0.6.0=py_0
  - multiprocess=0.70.14=py39hb9d737c_3
  - munch=3.0.0=pyhd8ed1ab_0
  - munkres=1.1.4=pyh9f0ad1d_0
  - myproxyclient=2.1.0=pyhd8ed1ab_2
  - mysql-common=8.0.32=hf1915f5_2
  - mysql-libs=8.0.32=hca2cd23_2
  - nbclassic=1.0.0=pyhb4ecaf3_1
  - nbclient=0.7.4=pyhd8ed1ab_0
  - nbconvert=7.4.0=pyhd8ed1ab_0
  - nbconvert-core=7.4.0=pyhd8ed1ab_0
  - nbconvert-pandoc=7.4.0=pyhd8ed1ab_0
  - nbdime=3.2.1=pyhd8ed1ab_0
  - nbformat=5.9.0=pyhd8ed1ab_0
  - nbresuse=0.4.0=pyhd8ed1ab_0
  - nbval=0.9.6=pyh9f0ad1d_0
  - nc-time-axis=1.4.1=pyhd8ed1ab_0
  - ncurses=6.3=h27087fc_1
  - nest-asyncio=1.5.6=pyhd8ed1ab_0
  - nested_dict=1.61=pyhd3deb0d_0
  - netcdf-fortran=4.6.0=mpi_mpich_h1e13492_2
  - netcdf4=1.6.2=nompi_py39hfaa66c4_100
  - nettle=3.8.1=hc379101_1
  - networkx=3.1=pyhd8ed1ab_0
  - nodeenv=1.8.0=pyhd8ed1ab_0
  - nodejs=18.15.0=h8d033a5_0
  - notebook=6.5.4=pyha770c72_0
  - notebook-shim=0.2.3=pyhd8ed1ab_0
  - nspr=4.35=h27087fc_0
  - nss=3.89=he45b914_0
  - numba=0.57.0=py39hb75a051_1
  - numcodecs=0.11.0=py39h227be39_1
  - numpy=1.23.5=py39h3d75532_0
  - numpy_groupies=0.9.22=pyhd8ed1ab_0
  - oauthlib=3.2.2=pyhd8ed1ab_0
  - openblas=0.3.21=pthreads_h320a7e8_3
  - openjpeg=2.5.0=hfec8fc6_2
  - openssl=3.1.1=hd590300_1
  - orc=1.8.3=hfdbbad2_0
  - outcome=1.2.0=pyhd8ed1ab_0
  - owslib=0.28.1=pyhd8ed1ab_0
  - p11-kit=0.24.1=hc5aa10d_0
  - packaging=23.1=pyhd8ed1ab_0
  - pamela=1.0.0=py_0
  - pandas=1.3.5=py39hde0f152_0
  - pandoc=2.19.2=h32600fe_2
  - pandocfilters=1.5.0=pyhd8ed1ab_0
  - panel=0.14.4=pyhd8ed1ab_0
  - parallelio=2.5.10=mpi_mpich_h862c5c2_100
  - param=1.13.0=pyh1a96a4e_0
  - paramiko=3.2.0=pyhd8ed1ab_0
  - parso=0.8.3=pyhd8ed1ab_0
  - partd=1.4.0=pyhd8ed1ab_0
  - pathos=0.3.0=pyhd8ed1ab_0
  - patsy=0.5.3=pyhd8ed1ab_0
  - pcre2=10.40=hc3806b6_0
  - pexpect=4.8.0=pyh1a96a4e_2
  - pickleshare=0.7.5=py_1003
  - pillow=9.4.0=py39h2320bf1_1
  - pint=0.21=pyhd8ed1ab_0
  - pip=23.1.2=pyhd8ed1ab_0
  - pixman=0.40.0=h36c2ea0_0
  - pkgutil-resolve-name=1.3.10=pyhd8ed1ab_0
  - platformdirs=3.5.1=pyhd8ed1ab_0
  - plotly=5.14.1=pyhd8ed1ab_0
  - pluggy=1.0.0=pyhd8ed1ab_5
  - ply=3.11=py_1
  - pooch=1.7.0=pyha770c72_3
  - poppler=23.01.0=h091648b_0
  - poppler-data=0.4.12=hd8ed1ab_0
  - postgresql=15.2=h3248436_0
  - pox=0.3.2=pyhd8ed1ab_0
  - ppft=1.7.6.6=pyhd8ed1ab_0
  - pre-commit=3.3.2=pyha770c72_0
  - proj=9.1.1=h8ffa02c_2
  - prometheus_client=0.17.0=pyhd8ed1ab_0
  - prompt-toolkit=3.0.38=pyha770c72_0
  - prompt_toolkit=3.0.38=hd8ed1ab_0
  - properscoring=0.1=py_0
  - protobuf=4.21.12=py39h227be39_0
  - pscript=0.7.7=pyhd8ed1ab_0
  - psutil=5.9.5=py39h72bdee0_0
  - pthread-stubs=0.4=h36c2ea0_1001
  - ptyprocess=0.7.0=pyhd3deb0d_0
  - pulseaudio=16.1=hcb278e6_3
  - pulseaudio-client=16.1=h5195f5e_3
  - pulseaudio-daemon=16.1=ha8d29e2_3
  - pure_eval=0.2.2=pyhd8ed1ab_0
  - pyarrow=10.0.1=py39he4327e9_25_cpu
  - pyasn1=0.4.8=py_0
  - pyasn1-modules=0.2.7=py_0
  - pycparser=2.21=pyhd8ed1ab_0
  - pyct=0.4.6=py_0
  - pyct-core=0.4.6=py_0
  - pycurl=7.45.1=py39h9297c8b_3
  - pydantic=1.10.8=py39hd1e30aa_0
  - pydap=3.4.0=pyhd8ed1ab_0
  - pydeck=0.8.0=pyhd8ed1ab_0
  - pygeos=0.14=py39hc9151fd_0
  - pygments=2.15.1=pyhd8ed1ab_0
  - pyjwt=2.7.0=pyhd8ed1ab_0
  - pymbolic=2022.2=pyhd8ed1ab_0
  - pymetalink=6.4=pyhd8ed1ab_0
  - pympler=1.0.1=pyhd8ed1ab_0
  - pynacl=1.5.0=py39hb9d737c_2
  - pyogrio=0.5.1=py39hbc5ff6d_0
  - pyopenssl=23.2.0=pyhd8ed1ab_1
  - pyparsing=3.0.9=pyhd8ed1ab_0
  - pyproj=3.5.0=py39hf8a5840_0
  - pyqt=5.15.7=py39h5c7b992_3
  - pyqt5-sip=12.11.0=py39h227be39_3
  - pyrsistent=0.19.3=py39h72bdee0_0
  - pyshp=2.3.1=pyhd8ed1ab_0
  - pysocks=1.7.1=pyha2e5f31_6
  - pytest=7.3.1=pyhd8ed1ab_0
  - pytest-xdist=3.3.1=pyhd8ed1ab_0
  - python=3.9.16=h2782a2a_0_cpython
  - python-dateutil=2.8.2=pyhd8ed1ab_0
  - python-eccodes=1.5.1=py39h389d5f1_0
  - python-fastjsonschema=2.17.1=pyhd8ed1ab_0
  - python-json-logger=2.0.7=pyhd8ed1ab_0
  - python-pptx=0.6.21=pyhd8ed1ab_0
  - python-tzdata=2023.3=pyhd8ed1ab_0
  - python_abi=3.9=3_cp39
  - pytools=2022.1.14=pyhd8ed1ab_0
  - pytz=2023.3=pyhd8ed1ab_0
  - pyu2f=0.1.5=pyhd8ed1ab_0
  - pyviz_comms=2.3.0=pyhd8ed1ab_0
  - pywavelets=1.4.1=py39h389d5f1_0
  - pyyaml=6.0=py39hb9d737c_5
  - pyzmq=25.1.0=py39hb257651_0
  - qt-main=5.15.8=h5d23da1_6
  - qtconsole=5.4.3=pyhd8ed1ab_0
  - qtconsole-base=5.4.3=pyha770c72_0
  - qtpy=2.3.1=pyhd8ed1ab_0
  - rasterio=1.3.6=py39h09b1985_0
  - raven-hydro=0.2.1=py39h8e2dbb5_1
  - ravenpy=0.12.1=py39hf3d152e_0
  - rdma-core=28.9=h59595ed_1
  - re2=2023.03.02=h8c504da_0
  - readline=8.2=h8228510_1
  - regionmask=0.10.0=pyhd8ed1ab_0
  - requests=2.31.0=pyhd8ed1ab_0
  - requests-cache=1.0.1=pyhd8ed1ab_0
  - requests-magpie=0.2.0=pyhd8ed1ab_0
  - requests-oauthlib=1.3.1=pyhd8ed1ab_0
  - retrying=1.3.3=py_2
  - rfc3339-validator=0.1.4=pyhd8ed1ab_0
  - rfc3986-validator=0.1.1=pyh9f0ad1d_0
  - rioxarray=0.14.1=pyhd8ed1ab_0
  - roocs-utils=0.6.4=pyh1a96a4e_0
  - rsa=4.9=pyhd8ed1ab_0
  - rtree=1.0.1=py39hb102c33_1
  - ruamel.yaml=0.17.31=py39hd1e30aa_0
  - ruamel.yaml.clib=0.2.7=py39h72bdee0_1
  - s2n=1.3.44=h06160fa_0
  - s3fs=2023.5.0=pyhd8ed1ab_0
  - s3transfer=0.6.1=pyhd8ed1ab_0
  - scikit-image=0.20.0=py39h7c7b5a8_1
  - scikit-learn=1.2.2=py39hc236052_2
  - scipy=1.9.1=py39h8ba3f38_0
  - scp=0.14.5=pyhd8ed1ab_0
  - seaborn=0.12.2=hd8ed1ab_0
  - seaborn-base=0.12.2=pyhd8ed1ab_0
  - selenium=4.9.1=pyhd8ed1ab_0
  - semver=3.0.0=pyhd8ed1ab_0
  - send2trash=1.8.2=pyh41d4057_0
  - setuptools=59.8.0=py39hf3d152e_1
  - shapely=2.0.1=py39hc9151fd_0
  - simpervisor=1.0.0=pyhd8ed1ab_0
  - sip=6.7.9=py39h3d6467e_0
  - siphon=0.9=pyhd8ed1ab_2
  - six=1.16.0=pyh6c4a22f_0
  - smmap=3.0.5=pyh44b312d_0
  - snappy=1.1.10=h9fff704_0
  - sniffio=1.3.0=pyhd8ed1ab_0
  - snuggs=1.4.7=py_0
  - sortedcontainers=2.4.0=pyhd8ed1ab_0
  - soupsieve=2.3.2.post1=pyhd8ed1ab_0
  - sparse=0.14.0=pyhd8ed1ab_0
  - spotpy=1.6.2=pyhd8ed1ab_0
  - sqlalchemy=2.0.15=py39hd1e30aa_0
  - sqlite=3.42.0=h2c6b66d_0
  - stack_data=0.6.2=pyhd8ed1ab_0
  - statsmodels=0.14.0=py39h0f8d45d_1
  - streamlit=1.8.0=pyhd8ed1ab_0
  - tblib=1.7.0=pyhd8ed1ab_0
  - tenacity=8.2.2=pyhd8ed1ab_0
  - terminado=0.17.1=pyh41d4057_0
  - threadpoolctl=3.1.0=pyh8a188c0_0
  - threddsclient=0.4.2=py_0
  - tifffile=2023.4.12=pyhd8ed1ab_0
  - tiledb=2.13.2=hd532e3d_0
  - tinycss2=1.2.1=pyhd8ed1ab_0
  - tk=8.6.12=h27826a3_0
  - toml=0.10.2=pyhd8ed1ab_0
  - tomli=2.0.1=pyhd8ed1ab_0
  - toolz=0.12.0=pyhd8ed1ab_0
  - tornado=6.3.2=py39hd1e30aa_0
  - tqdm=4.65.0=pyhd8ed1ab_1
  - traitlets=5.9.0=pyhd8ed1ab_0
  - traittypes=0.2.1=pyh9f0ad1d_2
  - trio=0.22.0=py39hf3d152e_1
  - trio-websocket=0.10.2=pyhd8ed1ab_0
  - typing-extensions=4.6.2=hd8ed1ab_0
  - typing_extensions=4.6.2=pyha770c72_0
  - tzcode=2023c=h0b41bf4_0
  - tzdata=2023c=h71feb2d_0
  - tzlocal=5.0.1=py39hf3d152e_0
  - ucx=1.14.1=hf587318_2
  - ujson=5.7.0=py39h227be39_0
  - ukkonen=1.0.1=py39hf939315_3
  - unicodedata2=15.0.0=py39hb9d737c_0
  - url-normalize=1.4.3=pyhd8ed1ab_0
  - urllib3=1.26.15=pyhd8ed1ab_0
  - urlpath=1.2.0=pyhd8ed1ab_0
  - validators=0.20.0=pyhd8ed1ab_0
  - virtualenv=20.23.0=pyhd8ed1ab_0
  - voila=0.4.0=pyhd8ed1ab_0
  - watchdog=3.0.0=py39hf3d152e_0
  - wcwidth=0.2.6=pyhd8ed1ab_0
  - webencodings=0.5.1=py_1
  - webob=1.8.7=pyhd8ed1ab_0
  - websocket-client=1.5.2=pyhd8ed1ab_0
  - websockets=11.0.3=py39hd1e30aa_0
  - werkzeug=2.3.4=pyhd8ed1ab_0
  - wget=1.20.3=ha35d2d1_1
  - wheel=0.40.0=pyhd8ed1ab_0
  - widgetsnbextension=4.0.7=pyhd8ed1ab_0
  - wrapt=1.15.0=py39h72bdee0_0
  - wsproto=1.2.0=pyhd8ed1ab_0
  - xarray=2023.1.0=pyhd8ed1ab_0
  - xcb-util=0.4.0=h516909a_0
  - xcb-util-image=0.4.0=h166bdaf_0
  - xcb-util-keysyms=0.4.0=h516909a_0
  - xcb-util-renderutil=0.3.9=h166bdaf_0
  - xcb-util-wm=0.4.1=h516909a_0
  - xclim=0.43.0=py39hf3d152e_1
  - xerces-c=3.2.4=h55805fa_1
  - xesmf=0.7.1=pyhd8ed1ab_0
  - xeus=3.0.5=hac2b420_1
  - xeus-python=0.15.9=py39h7633fee_0
  - xeus-python-shell=0.5.0=pyhd8ed1ab_0
  - xeus-python-shell-raw=0.5.0=pyhd8ed1ab_0
  - xeus-zmq=1.0.3=h0541b36_0
  - xhistogram=0.3.2=pyhd8ed1ab_0
  - xkeyboard-config=2.38=h0b41bf4_0
  - xlrd=2.0.1=pyhd8ed1ab_3
  - xlsxwriter=3.1.2=pyhd8ed1ab_0
  - xorg-damageproto=1.2.1=h7f98852_1002
  - xorg-fixesproto=5.0=h7f98852_1002
  - xorg-glproto=1.4.17=h7f98852_1002
  - xorg-inputproto=2.3.2=h7f98852_1002
  - xorg-kbproto=1.0.7=h7f98852_1002
  - xorg-libice=1.1.1=hd590300_0
  - xorg-libsm=1.2.4=h7391055_0
  - xorg-libx11=1.8.4=h0b41bf4_0
  - xorg-libxau=1.0.11=hd590300_0
  - xorg-libxdamage=1.1.5=h7f98852_1
  - xorg-libxdmcp=1.1.3=h7f98852_0
  - xorg-libxext=1.3.4=h0b41bf4_2
  - xorg-libxfixes=5.0.3=h7f98852_1004
  - xorg-libxi=1.7.10=h7f98852_0
  - xorg-libxrandr=1.5.2=h7f98852_1
  - xorg-libxrender=0.9.10=h7f98852_1003
  - xorg-randrproto=1.5.0=h7f98852_1001
  - xorg-renderproto=0.11.1=h7f98852_1002
  - xorg-util-macros=1.19.3=h7f98852_0
  - xorg-xextproto=7.3.0=h0b41bf4_1003
  - xorg-xf86vidmodeproto=2.3.1=h7f98852_1002
  - xorg-xproto=7.0.31=h7f98852_1007
  - xrft=1.0.1=pyhd8ed1ab_0
  - xskillscore=0.0.24=pyhd8ed1ab_0
  - xyzservices=2023.5.0=pyhd8ed1ab_1
  - xz=5.2.6=h166bdaf_0
  - y-py=0.5.9=py39h50f1755_0
  - yaml=0.2.5=h7f98852_2
  - yarl=1.9.2=py39hd1e30aa_0
  - ypy-websocket=0.8.2=pyhd8ed1ab_0
  - zarr=2.14.2=pyhd8ed1ab_0
  - zeromq=4.3.4=h9c3ff4c_1
  - zfp=1.0.0=h27087fc_3
  - zict=3.0.0=pyhd8ed1ab_0
  - zipp=3.15.0=pyhd8ed1ab_0
  - zlib=1.2.13=h166bdaf_4
  - zlib-ng=2.0.7=h0b41bf4_0
  - zstd=1.5.2=h3eb15da_6
  - pip:
      - arrow==1.2.3
      - astunparse==1.6.3
      - colour==0.1.5
      - dnspython==2.3.0
      - email-validator==2.0.0.post2
      - fqdn==1.5.1
      - geojson==3.0.1
      - hsclient==0.3.3
      - hsmodels==0.5.5
      - ipython-blocking==0.3.1
      - isodate==0.6.1
      - isoduration==20.11.0
      - jsonpointer==2.3
      - jupyterlab-logout==0.5.0
      - jupyterlab-tabular-data-editor==1.0.0
      - jupyternotify==0.1.15
      - pixiedust==1.1.19
      - pytest-tornasync==0.6.0.post2
      - rdflib==5.0.0
      - uri-template==1.2.0
      - webcolors==1.13
      - xmltodict==0.13.0
      - xncml==0.2
      - xsdata==23.5
prefix: /opt/conda/envs/birdy
```

Docker build log:  Forgot to save manual build
  • Loading branch information
tlvu authored Jun 6, 2023
2 parents 3191ff5 + 528e6b6 commit d2c89f6
Show file tree
Hide file tree
Showing 7 changed files with 10 additions and 10 deletions.
2 changes: 1 addition & 1 deletion Jenkinsfile
Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,7 @@ pipeline {
// https://jenkins.io/doc/book/pipeline/syntax/
agent {
docker {
image "pavics/workflow-tests:230530-1"
image "pavics/workflow-tests:230601"
label 'linux && docker'
}
}
Expand Down
2 changes: 1 addition & 1 deletion binder/Dockerfile
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
FROM pavics/workflow-tests:230530-1
FROM pavics/workflow-tests:230601

USER root

Expand Down
6 changes: 3 additions & 3 deletions binder/reorg-notebooks
Original file line number Diff line number Diff line change
Expand Up @@ -7,9 +7,9 @@

rm -r esgf-compute-api-$ESGF_COMPUTE_API_BRANCH

mkdir raven
mv -v raven-${RAVEN_BRANCH}/docs/source/notebooks/*.ipynb ./raven/
mv -v RavenPy-${RAVENPY_BRANCH}/docs/notebooks/*.ipynb ./raven/
mkdir hydro
mv -v raven-${RAVEN_BRANCH}/docs/source/notebooks/*.ipynb ./hydro/
mv -v RavenPy-${RAVENPY_BRANCH}/docs/notebooks/*.ipynb ./hydro/
rm -r raven-${RAVEN_BRANCH} RavenPy-${RAVENPY_BRANCH}

if [ -n "$DEPLOY_PAVICS_LANDING_NB" ]; then
Expand Down
4 changes: 2 additions & 2 deletions docker/Dockerfile.testing
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
# For testing quickly without having to do a full rebuild.

FROM pavics/workflow-tests:230526-1
FROM pavics/workflow-tests:230530-1

#ENV ESMFMKFILE="/opt/conda/envs/birdy/lib/esmf.mk"

Expand All @@ -11,7 +11,7 @@ USER root
# Use 'update' for existing and 'install' for new package.
# Keep same channel ordering to not revert anything.
RUN umask 0000 \
&& mamba install -c conda-forge -c cdat -c bokeh -c plotly -c pyviz/label/dev -c defaults -n birdy numpy==1.23.5 pytest-xdist \
&& mamba install -c conda-forge -c cdat -c bokeh -c plotly -c pyviz/label/dev -c defaults -n birdy ravenpy==0.12.1 \
&& mamba clean --all --yes
# && pip uninstall -y ravenpy \
# && mamba install -c conda-forge -c cdat -c bokeh -c plotly -c defaults -n birdy ravenpy aiohttp
Expand Down
2 changes: 1 addition & 1 deletion docker/environment.yml
Original file line number Diff line number Diff line change
Expand Up @@ -20,7 +20,7 @@ dependencies:
# Pin latest xclim and ravenpy to avoid downgrading during the second installation phase.
# Mamba is quicker to solve dependencies than conda, but it is less precise so accidental downgrades can happen.
- xclim >= 0.43.0
- ravenpy >= 0.12.0
- ravenpy >= 0.12.1

#- dask # from xclim and ravenpy
#- distributed
Expand Down
2 changes: 1 addition & 1 deletion launchcontainer
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
#!/bin/sh -x

if [ -z "$DOCKER_IMAGE" ]; then
DOCKER_IMAGE="pavics/workflow-tests:230530-1"
DOCKER_IMAGE="pavics/workflow-tests:230601"
fi

if [ -z "$CONTAINER_NAME" ]; then
Expand Down
2 changes: 1 addition & 1 deletion launchnotebook
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ if [ -z "$PORT" ]; then
fi

if [ -z "$DOCKER_IMAGE" ]; then
DOCKER_IMAGE="pavics/workflow-tests:230530-1"
DOCKER_IMAGE="pavics/workflow-tests:230601"
fi

if [ -z "$CONTAINER_NAME" ]; then
Expand Down

0 comments on commit d2c89f6

Please sign in to comment.