refactor(robot-server): consolidate runs into a single Run model

[mcous]

Overview

As discussed in Slack, this is a simplification PR to remove the unnecessary distinction between a BasicRun and a ProtocolRun.

Changelog

• Instead of two different types of runs, there is now one Run, which may optionally point to a protocolId if it's there to run a protocol

Review requests

Code changes make sense. This back-end PR requires a corresponding front-end PR

Risk assessment

Low

[codecov]

Codecov Report

Merging #8685 (bec64ca) into edge (4dfbc6f) will decrease coverage by 0.01%.
The diff coverage is 100.00%.

@@            Coverage Diff             @@
##             edge    #8685      +/-   ##
==========================================
- Coverage   75.23%   75.22%   -0.02%     
==========================================
  Files        1207     1207              
  Lines       37959    37934      -25     
  Branches     2792     2792              
==========================================
- Hits        28559    28535      -24     
+ Misses       8999     8998       -1     
  Partials      401      401              

Flag	Coverage Δ
robot-server	93.39% <100.00%> (-0.02%)	⬇️

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files	Coverage Δ
...bot-server/robot_server/runs/router/base_router.py	96.07% <100.00%> (-0.04%)	⬇️
robot-server/robot_server/runs/run_models.py	100.00% <100.00%> (ø)
robot-server/robot_server/runs/run_store.py	100.00% <100.00%> (ø)
robot-server/robot_server/runs/run_view.py	100.00% <100.00%> (+3.44%)	⬆️

[SyntaxColoring]

Is the idea for this single commands list to contain both LPC commands and protocol commands?

If so, I guess it would take annotations to separate LPC commands from the actual protocol run log. Since we don't have that yet, is App+UI fine with not having that ability, for now?

[b-cooper]

Yes I think we're fine with that ability, because we will be using the protocol analysis commands as the scaffolding for the run log. We shouldn't need to use annotations to start the run log at the right command.